Protein–RNA interactions for Protein: A0A0A0MS05

TRBV5-7, T-cell receptor beta variable 5-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-7A0A0A0MS05 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV5-7A0A0A0MS05 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-7A0A0A0MS05 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV5-7A0A0A0MS05 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
TRBV5-7A0A0A0MS05 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRBV5-7A0A0A0MS05 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-7A0A0A0MS05 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.58■□□□□ 0.57
TRBV5-7A0A0A0MS05 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-7A0A0A0MS05 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV5-7A0A0A0MS05 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 OXCT2P1-201ENST00000447263 1535 ntBASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV5-7A0A0A0MS05 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 AC006455.2-201ENST00000429931 906 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 pRNA.6-201ENST00000610482 90 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 pRNA.5-201ENST00000612139 90 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 pRNA.11-201ENST00000618423 90 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 pRNA.13-201ENST00000619112 90 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 AC068587.7-201ENST00000641602 218 ntBASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV5-7A0A0A0MS05 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 TSPY9P-201ENST00000440215 945 ntBASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 TSPY11P-201ENST00000442607 1045 ntBASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV5-7A0A0A0MS05 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 AC239859.2-201ENST00000444165 318 ntBASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV5-7A0A0A0MS05 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
TRBV5-7A0A0A0MS05 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-7A0A0A0MS05 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-7A0A0A0MS05 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-7A0A0A0MS05 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV5-7A0A0A0MS05 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms