Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ZNF859P-201ENST00000502859 1966 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC087525.1-202ENST00000559821 1988 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ELOC-210ENST00000622804 1976 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 KNOP1P4-201ENST00000445020 1438 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ZNF550-205ENST00000457177 3376 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC112200.2-201ENST00000624673 1739 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 TTK-208ENST00000509894 3725 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 KRBOX1-203ENST00000426937 826 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC079154.1-201ENST00000438816 542 ntTSL 4 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC012513.2-201ENST00000441511 1137 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC002472.1-201ENST00000450652 563 ntTSL 4 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 JPT1-205ENST00000470924 663 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 CR545473.1-201ENST00000511554 277 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 GFRA2-203ENST00000517892 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 BOLA3P2-201ENST00000586496 323 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC013564.1-201ENST00000612806 707 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC072062.1-201ENST00000617699 351 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 PASK-216ENST00000629419 216 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 HK2P1-201ENST00000447818 2737 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AP000911.1-203ENST00000529070 1673 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 AC111182.1-201ENST00000588701 3419 ntBASIC12.63□□□□□ -0.39
LMO3Q8TAP4 FAM13C-202ENST00000435852 2088 ntTSL 2 BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LMO3Q8TAP4 FHL2-204ENST00000393352 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CHIAP2-204ENST00000532686 1449 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AC009159.4-201ENST00000624606 2031 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 FIRRE-201ENST00000427391 2926 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ZFAND4-202ENST00000344646 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 LYPD6-203ENST00000409381 3578 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 YAF2-203ENST00000534854 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ACTN4P1-201ENST00000514175 1451 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 KRT8P6-201ENST00000399259 1207 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 RFPL3S-203ENST00000400234 1295 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ATP6AP1L-202ENST00000439350 758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 SURF6P1-201ENST00000451854 827 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 RN7SL255P-201ENST00000470639 296 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AC011362.1-201ENST00000507050 485 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AC022182.1-203ENST00000527672 926 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 MGAT4EP-202ENST00000549576 936 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AC080080.2-201ENST00000624307 590 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 UBA3-212ENST00000630585 390 ntTSL 4 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 AL606534.6-201ENST00000611420 1838 ntBASIC12.62□□□□□ -0.39
LMO3Q8TAP4 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LMO3Q8TAP4 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms