Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC1A1P43005 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 ATP1A1-AS1-201ENST00000369491 773 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AL158151.2-201ENST00000434250 241 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC253536.1-201ENST00000437021 315 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 RN7SL479P-201ENST00000472003 300 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 RN7SL76P-201ENST00000482435 289 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 AC010234.1-201ENST00000494599 870 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AL118516.1-201ENST00000564152 670 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC099518.2-201ENST00000565802 704 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 AC023043.1-201ENST00000568654 609 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC026367.1-201ENST00000605329 611 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC112702.1-201ENST00000623712 366 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 TPRXL-213ENST00000636198 651 ntBASIC12.47□□□□□ -0.41
SLC1A1P43005 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 RHO-201ENST00000296271 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 COL25A1-202ENST00000399127 2500 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 MAGED2-204ENST00000375058 2048 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 USP17L4-201ENST00000526929 1593 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC1A1P43005 USP17L1-201ENST00000529559 1593 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC1A1P43005 USP17L3-201ENST00000530484 1593 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC1A1P43005 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 SULF2-211ENST00000484875 4238 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 LYPD6-203ENST00000409381 3578 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 AL356234.1-201ENST00000404534 1779 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A3P-201ENST00000506444 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A4P-201ENST00000509856 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A18P-201ENST00000527117 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A20P-201ENST00000528221 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A10P-201ENST00000530206 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM90A19P-201ENST00000533611 1395 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 PLUT-201ENST00000499662 2518 ntTSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC1A1P43005 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC007614.5-201ENST00000623424 8892 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 PLP2-201ENST00000376322 620 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 RN7SKP218-201ENST00000410222 292 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 TPT1P9-201ENST00000413759 514 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 BX088651.3-201ENST00000418155 352 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 CRIP1P2-201ENST00000425396 228 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 AC007128.2-201ENST00000435967 557 ntTSL 4 BASIC12.46□□□□□ -0.41
SLC1A1P43005 PRDX3P2-201ENST00000447051 611 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC12.46□□□□□ -0.41
SLC1A1P43005 RN7SL43P-201ENST00000463926 291 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 RN7SL838P-201ENST00000481676 295 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 AC026785.1-201ENST00000505520 580 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC027373.1-201ENST00000564694 1142 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 PIGBOS1-203ENST00000567948 801 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC1A1P43005 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC12.46□□□□□ -0.41
SLC1A1P43005 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC1A1P43005 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC12.46□□□□□ -0.41
SLC1A1P43005 KIF28P-202ENST00000504864 3064 ntBASIC12.46□□□□□ -0.41
SLC1A1P43005 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SLC1A1P43005 CARD8-221ENST00000521613 1903 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
SLC1A1P43005 AC093525.7-201ENST00000569852 3626 ntBASIC12.46□□□□□ -0.42
SLC1A1P43005 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SLC1A1P43005 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SLC1A1P43005 ELF5-202ENST00000312319 2450 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SLC1A1P43005 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC12.46□□□□□ -0.42
SLC1A1P43005 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SLC1A1P43005 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC12.46□□□□□ -0.42
SLC1A1P43005 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms