Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 RARRES2P11-201ENST00000635158 484 ntBASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HRH3Q9Y5N1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.83■□□□□ 0.77
HRH3Q9Y5N1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 AC080038.3-201ENST00000623346 1952 ntBASIC19.83■□□□□ 0.76
HRH3Q9Y5N1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 AC090192.1-201ENST00000517740 490 ntBASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 SMUG1P1-201ENST00000590640 811 ntBASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 AL137784.2-201ENST00000607332 1000 ntBASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HRH3Q9Y5N1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 AC068587.7-201ENST00000641602 218 ntBASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HRH3Q9Y5N1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 TERF1P2-201ENST00000583350 1212 ntBASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 AC105233.4-201ENST00000642045 216 ntBASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HRH3Q9Y5N1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 LINC00526-201ENST00000581067 1875 ntBASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 KRT18P14-201ENST00000534205 1250 ntBASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.79■□□□□ 0.76
HRH3Q9Y5N1 NTF6G-201ENST00000591094 616 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms