Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L2-201ENST00000561772 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L6-201ENST00000626483 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L1-201ENST00000627662 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L8-201ENST00000629013 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L3-201ENST00000630187 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L7-201ENST00000630678 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 DUX4L5-201ENST00000630834 1275 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 LINC02228-203ENST00000641970 1355 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 AC005224.4-201ENST00000583262 1652 ntBASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN16Q9Y5I7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN16Q9Y5I7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 AC092053.2-201ENST00000640557 1818 ntBASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 AC055733.4-201ENST00000638462 1354 ntBASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 AL117328.2-201ENST00000624617 1940 ntBASIC20.14■□□□□ 0.81
CLDN16Q9Y5I7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 AC009237.3-201ENST00000393279 1427 ntBASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN16Q9Y5I7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN16Q9Y5I7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN16Q9Y5I7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 KRT18P14-201ENST00000534205 1250 ntBASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 AL034346.1-201ENST00000568244 1277 ntBASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 KRT18P61-201ENST00000585825 1298 ntBASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN16Q9Y5I7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 AP006587.3-201ENST00000525742 1516 ntBASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLDN16Q9Y5I7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms