Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA9Q9Y5G4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA9Q9Y5G4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 NCF1B-203ENST00000435988 1254 ntBASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 AL109923.1-201ENST00000618799 583 ntBASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA9Q9Y5G4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 AC079140.4-201ENST00000507448 529 ntBASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 AC011767.1-201ENST00000617410 1153 ntBASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA9Q9Y5G4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 AC079630.1-202ENST00000618127 1840 ntBASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA9Q9Y5G4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHGA9Q9Y5G4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 AL355802.2-201ENST00000402069 882 ntBASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA9Q9Y5G4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA9Q9Y5G4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms