Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC073111.5-205ENST00000641717 521 ntBASIC24.92■■□□□ 1.58
CTDP1Q9Y5B0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CTDP1Q9Y5B0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 AC104187.1-201ENST00000607510 612 ntBASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CTDP1Q9Y5B0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CTDP1Q9Y5B0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 AC026185.1-201ENST00000445748 174 ntBASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CTDP1Q9Y5B0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CTDP1Q9Y5B0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CTDP1Q9Y5B0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.89■■□□□ 1.57
CTDP1Q9Y5B0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CTDP1Q9Y5B0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 CDCA4P2-201ENST00000441182 718 ntBASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 AC011767.1-201ENST00000617410 1153 ntBASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.88■■□□□ 1.57
CTDP1Q9Y5B0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CTDP1Q9Y5B0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 AL034346.1-201ENST00000568244 1277 ntBASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.86■■□□□ 1.57
CTDP1Q9Y5B0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 HLA-L-209ENST00000420110 1011 ntBASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CTDP1Q9Y5B0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 AC006970.2-201ENST00000450065 779 ntBASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.84■■□□□ 1.57
CTDP1Q9Y5B0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.83■■□□□ 1.57
CTDP1Q9Y5B0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms