Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPS28Q9Y2Q9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 Z98882.1-201ENST00000622160 2253 ntBASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPS28Q9Y2Q9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 MIR6724-1-201ENST00000616420 92 ntBASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 MIR6724-2-201ENST00000616483 92 ntBASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 MIR6724-4-201ENST00000617390 92 ntBASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 MIR6724-3-201ENST00000622482 92 ntBASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 AL031602.1-201ENST00000633169 911 ntBASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MRPS28Q9Y2Q9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 RARRES2P1-201ENST00000474487 481 ntBASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 AC009299.2-201ENST00000482477 511 ntBASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 AC079089.2-201ENST00000531211 1277 ntBASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPS28Q9Y2Q9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 AL451085.2-201ENST00000605085 799 ntBASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 AC133637.1-201ENST00000624115 1537 ntBASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MRPS28Q9Y2Q9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
MRPS28Q9Y2Q9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 OR7E47P-201ENST00000546390 1422 ntBASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MRPS28Q9Y2Q9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MRPS28Q9Y2Q9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms