Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COPS3Q9UNS2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.14■□□□□ 0.66
COPS3Q9UNS2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COPS3Q9UNS2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COPS3Q9UNS2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 MIR6724-1-201ENST00000616420 92 ntBASIC19.14■□□□□ 0.65
COPS3Q9UNS2 MIR6724-2-201ENST00000616483 92 ntBASIC19.14■□□□□ 0.65
COPS3Q9UNS2 MIR6724-4-201ENST00000617390 92 ntBASIC19.14■□□□□ 0.65
COPS3Q9UNS2 MIR6724-3-201ENST00000622482 92 ntBASIC19.14■□□□□ 0.65
COPS3Q9UNS2 AL031602.1-201ENST00000633169 911 ntBASIC19.14■□□□□ 0.65
COPS3Q9UNS2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COPS3Q9UNS2 AC026471.6-201ENST00000622954 1905 ntBASIC19.13■□□□□ 0.65
COPS3Q9UNS2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 Z98882.1-201ENST00000622160 2253 ntBASIC19.13■□□□□ 0.65
COPS3Q9UNS2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 AC006455.2-201ENST00000429931 906 ntBASIC19.13■□□□□ 0.65
COPS3Q9UNS2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COPS3Q9UNS2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPS3Q9UNS2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 AC133637.1-201ENST00000624115 1537 ntBASIC19.11■□□□□ 0.65
COPS3Q9UNS2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COPS3Q9UNS2 AF106564.1-201ENST00000607058 2553 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 AC079089.2-201ENST00000531211 1277 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 pRNA.6-201ENST00000610482 90 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 pRNA.5-201ENST00000612139 90 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 pRNA.11-201ENST00000618423 90 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 pRNA.13-201ENST00000619112 90 ntBASIC19.1■□□□□ 0.65
COPS3Q9UNS2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COPS3Q9UNS2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.09■□□□□ 0.65
COPS3Q9UNS2 AC241377.3-202ENST00000626088 1088 ntBASIC19.09■□□□□ 0.65
COPS3Q9UNS2 AC241585.3-202ENST00000628937 1088 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms