Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNX6Q9UNH7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
SNX6Q9UNH7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 AC010525.1-201ENST00000585559 441 ntBASIC20.82■□□□□ 0.92
SNX6Q9UNH7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX6Q9UNH7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.82■□□□□ 0.92
SNX6Q9UNH7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX6Q9UNH7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SNX6Q9UNH7 OXCT2P1-201ENST00000447263 1535 ntBASIC20.79■□□□□ 0.92
SNX6Q9UNH7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SNX6Q9UNH7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 AL136116.3-201ENST00000402907 1138 ntBASIC20.78■□□□□ 0.92
SNX6Q9UNH7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 AC007375.3-201ENST00000600936 2314 ntBASIC20.78■□□□□ 0.92
SNX6Q9UNH7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNX6Q9UNH7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 AP005435.1-201ENST00000529293 1178 ntBASIC20.77■□□□□ 0.92
SNX6Q9UNH7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNX6Q9UNH7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.77■□□□□ 0.91
SNX6Q9UNH7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 AL024507.2-201ENST00000606070 2574 ntBASIC20.76■□□□□ 0.91
SNX6Q9UNH7 AC244015.2-201ENST00000616358 1861 ntBASIC20.76■□□□□ 0.91
SNX6Q9UNH7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX6Q9UNH7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX6Q9UNH7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.75■□□□□ 0.91
SNX6Q9UNH7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms