Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC3Q9UN70 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGC3Q9UN70 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGC3Q9UN70 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 AP004607.7-201ENST00000527152 1677 ntBASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC3Q9UN70 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 AC105233.4-201ENST00000642045 216 ntBASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC3Q9UN70 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHGC3Q9UN70 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHGC3Q9UN70 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 AC010542.4-201ENST00000563151 1910 ntBASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC3Q9UN70 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDHGC3Q9UN70 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGC3Q9UN70 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGC3Q9UN70 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDHGC3Q9UN70 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGC3Q9UN70 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 AC026471.6-201ENST00000622954 1905 ntBASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC3Q9UN70 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms