Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 TPRG1LP1-201ENST00000598702 760 ntBASIC24.74■■□□□ 1.55
DDX41Q9UJV9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 AC010141.3-201ENST00000456659 717 ntBASIC24.73■■□□□ 1.55
DDX41Q9UJV9 RARRES2P11-201ENST00000635158 484 ntBASIC24.73■■□□□ 1.55
DDX41Q9UJV9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX41Q9UJV9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.72■■□□□ 1.55
DDX41Q9UJV9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX41Q9UJV9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX41Q9UJV9 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.7■■□□□ 1.55
DDX41Q9UJV9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.55
DDX41Q9UJV9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 SMUG1P1-201ENST00000590640 811 ntBASIC24.7■■□□□ 1.54
DDX41Q9UJV9 AC087239.1-201ENST00000622671 572 ntBASIC24.7■■□□□ 1.54
DDX41Q9UJV9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX41Q9UJV9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 BX005040.4-201ENST00000637145 1518 ntBASIC24.69■■□□□ 1.54
DDX41Q9UJV9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
DDX41Q9UJV9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 ANOS2P-203ENST00000472227 1816 ntBASIC24.68■■□□□ 1.54
DDX41Q9UJV9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 AC090192.1-201ENST00000517740 490 ntBASIC24.68■■□□□ 1.54
DDX41Q9UJV9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 KRT18P61-201ENST00000585825 1298 ntBASIC24.68■■□□□ 1.54
DDX41Q9UJV9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 LINC00526-201ENST00000581067 1875 ntBASIC24.68■■□□□ 1.54
DDX41Q9UJV9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
DDX41Q9UJV9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.67■■□□□ 1.54
DDX41Q9UJV9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
DDX41Q9UJV9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.66■■□□□ 1.54
DDX41Q9UJV9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX41Q9UJV9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX41Q9UJV9 AC004911.1-201ENST00000416316 871 ntBASIC24.66■■□□□ 1.54
DDX41Q9UJV9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms