Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF2Q9P2I0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CPSF2Q9P2I0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPSF2Q9P2I0 AC073130.3-201ENST00000624389 2278 ntBASIC21.58■■□□□ 1.04
CPSF2Q9P2I0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 C17orf82-201ENST00000623772 1530 ntBASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 AC010542.4-201ENST00000563151 1910 ntBASIC21.57■■□□□ 1.04
CPSF2Q9P2I0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 FAM99A-202ENST00000538190 1989 ntBASIC21.56■■□□□ 1.04
CPSF2Q9P2I0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.55■■□□□ 1.04
CPSF2Q9P2I0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 UNC93B8-201ENST00000511903 705 ntBASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPSF2Q9P2I0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 AC026310.3-201ENST00000625186 2373 ntBASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF2Q9P2I0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MIR6724-1-201ENST00000616420 92 ntBASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MIR6724-2-201ENST00000616483 92 ntBASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MIR6724-4-201ENST00000617390 92 ntBASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 MIR6724-3-201ENST00000622482 92 ntBASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF2Q9P2I0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms