Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 NCF1B-203ENST00000435988 1254 ntBASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 AC104187.1-201ENST00000607510 612 ntBASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 AL109923.1-201ENST00000618799 583 ntBASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NLGN3Q9NZ94 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 MIR663A-201ENST00000385250 93 ntBASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NLGN3Q9NZ94 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 MFSD11-216ENST00000590393 1141 ntBASIC21.08■□□□□ 0.97
NLGN3Q9NZ94 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NLGN3Q9NZ94 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NLGN3Q9NZ94 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NLGN3Q9NZ94 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 AC092068.2-201ENST00000590491 1708 ntBASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 ANOS2P-203ENST00000472227 1816 ntBASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.07■□□□□ 0.96
NLGN3Q9NZ94 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 AC133561.1-201ENST00000568600 2415 ntBASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 AL355802.2-201ENST00000402069 882 ntBASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NLGN3Q9NZ94 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 GPX1P1-201ENST00000388829 606 ntBASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NLGN3Q9NZ94 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 AC068473.5-201ENST00000616428 2072 ntBASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NLGN3Q9NZ94 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms