Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
NELFAQ9H3P2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.16■□□□□ 0.66
NELFAQ9H3P2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.15■□□□□ 0.66
NELFAQ9H3P2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 TSPY26P-201ENST00000476365 1326 ntBASIC19.15■□□□□ 0.66
NELFAQ9H3P2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NELFAQ9H3P2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NELFAQ9H3P2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NELFAQ9H3P2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NELFAQ9H3P2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NELFAQ9H3P2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.14■□□□□ 0.66
NELFAQ9H3P2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NELFAQ9H3P2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 AC079089.2-201ENST00000531211 1277 ntBASIC19.13■□□□□ 0.65
NELFAQ9H3P2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NELFAQ9H3P2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 C11orf96-202ENST00000528572 1834 ntBASIC19.12■□□□□ 0.65
NELFAQ9H3P2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 AC010141.3-201ENST00000456659 717 ntBASIC19.12■□□□□ 0.65
NELFAQ9H3P2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NELFAQ9H3P2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
NELFAQ9H3P2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms