Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.98■■□□□ 1.27
SNX25Q9H3E2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 AC080038.3-201ENST00000623346 1952 ntBASIC22.97■■□□□ 1.27
SNX25Q9H3E2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
SNX25Q9H3E2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L2-201ENST00000561772 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L6-201ENST00000626483 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L1-201ENST00000627662 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L8-201ENST00000629013 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L3-201ENST00000630187 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L7-201ENST00000630678 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUX4L5-201ENST00000630834 1275 ntBASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SNX25Q9H3E2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 AC005224.4-201ENST00000583262 1652 ntBASIC22.95■■□□□ 1.26
SNX25Q9H3E2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNX25Q9H3E2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNX25Q9H3E2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 AL162430.1-201ENST00000480705 870 ntBASIC22.93■■□□□ 1.26
SNX25Q9H3E2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNX25Q9H3E2 AC233723.2-201ENST00000623798 2106 ntBASIC22.93■■□□□ 1.26
SNX25Q9H3E2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms