Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.95■□□□□ 0.78
UBQLN3Q9H347 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 AC068587.7-201ENST00000641602 218 ntBASIC19.94■□□□□ 0.78
UBQLN3Q9H347 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN3Q9H347 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN3Q9H347 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.92■□□□□ 0.78
UBQLN3Q9H347 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 MIR6821-201ENST00000617625 74 ntBASIC19.91■□□□□ 0.78
UBQLN3Q9H347 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBQLN3Q9H347 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 AC097381.1-201ENST00000429019 1296 ntBASIC19.9■□□□□ 0.78
UBQLN3Q9H347 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 AL358852.1-201ENST00000623174 1268 ntBASIC19.9■□□□□ 0.78
UBQLN3Q9H347 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
UBQLN3Q9H347 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.78
UBQLN3Q9H347 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBQLN3Q9H347 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN3Q9H347 AC012414.1-201ENST00000556676 535 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms