Protein–RNA interactions for Protein: Q9H000

MKRN2, Probable E3 ubiquitin-protein ligase makorin-2, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN2Q9H000 MIR663A-201ENST00000385250 93 ntBASIC21.7■■□□□ 1.06
MKRN2Q9H000 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.7■■□□□ 1.06
MKRN2Q9H000 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.7■■□□□ 1.06
MKRN2Q9H000 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.7■■□□□ 1.06
MKRN2Q9H000 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.7■■□□□ 1.06
MKRN2Q9H000 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MKRN2Q9H000 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MKRN2Q9H000 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MKRN2Q9H000 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MKRN2Q9H000 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MKRN2Q9H000 NCF1B-203ENST00000435988 1254 ntBASIC21.69■■□□□ 1.06
MKRN2Q9H000 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MKRN2Q9H000 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MKRN2Q9H000 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
MKRN2Q9H000 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MKRN2Q9H000 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.68■■□□□ 1.06
MKRN2Q9H000 UBE2DNL-204ENST00000602536 740 ntBASIC21.68■■□□□ 1.06
MKRN2Q9H000 AL109923.1-201ENST00000618799 583 ntBASIC21.68■■□□□ 1.06
MKRN2Q9H000 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MKRN2Q9H000 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MKRN2Q9H000 AP004607.7-201ENST00000527152 1677 ntBASIC21.68■■□□□ 1.06
MKRN2Q9H000 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.67■■□□□ 1.06
MKRN2Q9H000 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
MKRN2Q9H000 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MKRN2Q9H000 LINC00526-201ENST00000581067 1875 ntBASIC21.66■■□□□ 1.06
MKRN2Q9H000 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MKRN2Q9H000 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MKRN2Q9H000 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MKRN2Q9H000 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 AP001160.3-201ENST00000601484 763 ntBASIC21.66■■□□□ 1.06
MKRN2Q9H000 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MKRN2Q9H000 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MKRN2Q9H000 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.66■■□□□ 1.06
MKRN2Q9H000 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MKRN2Q9H000 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MKRN2Q9H000 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.65■■□□□ 1.06
MKRN2Q9H000 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MKRN2Q9H000 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.65■■□□□ 1.06
MKRN2Q9H000 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MKRN2Q9H000 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.64■■□□□ 1.06
MKRN2Q9H000 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MKRN2Q9H000 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
MKRN2Q9H000 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 AL355802.2-201ENST00000402069 882 ntBASIC21.64■■□□□ 1.05
MKRN2Q9H000 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 DUX4L16-201ENST00000555130 1264 ntBASIC21.64■■□□□ 1.05
MKRN2Q9H000 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MKRN2Q9H000 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MKRN2Q9H000 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
MKRN2Q9H000 OR7E47P-201ENST00000546390 1422 ntBASIC21.63■■□□□ 1.05
MKRN2Q9H000 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MKRN2Q9H000 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MKRN2Q9H000 AL050303.2-201ENST00000619798 666 ntBASIC21.63■■□□□ 1.05
MKRN2Q9H000 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
MKRN2Q9H000 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MKRN2Q9H000 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MKRN2Q9H000 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 GPX1P1-201ENST00000388829 606 ntBASIC21.62■■□□□ 1.05
MKRN2Q9H000 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.62■■□□□ 1.05
MKRN2Q9H000 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MKRN2Q9H000 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.62■■□□□ 1.05
MKRN2Q9H000 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms