Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 AL033527.3-201ENST00000566366 1196 ntBASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 LINC01006-201ENST00000333319 2292 ntBASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-1Q9BYR8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AC092667.1-201ENST00000434301 2586 ntBASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 YBX1P4-201ENST00000392794 808 ntBASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AC079089.2-201ENST00000531211 1277 ntBASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AL031848.2-201ENST00000607670 837 ntBASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 AL031602.1-201ENST00000633169 911 ntBASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
KRTAP3-1Q9BYR8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 HES6-204ENST00000409182 863 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 AC092028.1-203ENST00000608262 953 ntBASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
KRTAP3-1Q9BYR8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
KRTAP3-1Q9BYR8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP3-1Q9BYR8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.9□□□□□ -0.67
KRTAP3-1Q9BYR8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC10.9□□□□□ -0.67
KRTAP3-1Q9BYR8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
KRTAP3-1Q9BYR8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
KRTAP3-1Q9BYR8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms