Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 DNAJA1P1-201ENST00000425106 1187 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 UBE2V1P1-201ENST00000430836 445 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 MTCYBP12-201ENST00000440559 1134 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 AC080079.1-201ENST00000509326 1045 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 GMCL1P2-201ENST00000605230 823 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 HSPA8P19-201ENST00000505359 1517 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 MTCO1P22-201ENST00000604619 1360 ntBASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 CSRP3-201ENST00000265968 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 ABRACL-201ENST00000367660 845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 NEK4P1-201ENST00000433383 879 ntBASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 OR5H7P-201ENST00000514084 930 ntBASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 DYNLL1-208ENST00000550178 581 ntBASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC007610.3-201ENST00000566879 934 ntBASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
KRTAP3-3Q9BYR6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 NPM1P9-201ENST00000453156 844 ntBASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KRTAP3-3Q9BYR6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC092447.2-201ENST00000435487 669 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 FCF1P6-201ENST00000456841 595 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AP001619.2-201ENST00000458654 587 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 GTF2IP9-201ENST00000502460 301 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC009088.1-201ENST00000565152 833 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC007346.1-202ENST00000602826 684 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AL160394.1-201ENST00000624765 724 ntBASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KRTAP3-3Q9BYR6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
KRTAP3-3Q9BYR6 NPM1P48-201ENST00000436002 853 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms