Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHRDL1Q9BU40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 pRNA.6-201ENST00000610482 90 ntBASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 pRNA.5-201ENST00000612139 90 ntBASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 pRNA.11-201ENST00000618423 90 ntBASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 pRNA.13-201ENST00000619112 90 ntBASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRDL1Q9BU40 AC092053.2-201ENST00000640557 1818 ntBASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 SLC25A24-204ENST00000569674 2357 ntBASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 AC080038.3-201ENST00000623346 1952 ntBASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CHRDL1Q9BU40 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 MIR4466-201ENST00000606121 54 ntBASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHRDL1Q9BU40 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17■□□□□ 0.31
CHRDL1Q9BU40 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 C11orf96-202ENST00000528572 1834 ntBASIC17■□□□□ 0.31
CHRDL1Q9BU40 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17■□□□□ 0.31
CHRDL1Q9BU40 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRDL1Q9BU40 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 AC133637.1-201ENST00000624115 1537 ntBASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRDL1Q9BU40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 AL137060.1-201ENST00000618151 2648 ntBASIC16.98■□□□□ 0.31
CHRDL1Q9BU40 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms