Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB39BQ96DA2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB39BQ96DA2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 AC027612.3-201ENST00000413684 1047 ntBASIC18.36■□□□□ 0.53
RAB39BQ96DA2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 AC034268.1-201ENST00000441047 882 ntBASIC18.36■□□□□ 0.53
RAB39BQ96DA2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 AC068587.7-201ENST00000641602 218 ntBASIC18.36■□□□□ 0.53
RAB39BQ96DA2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB39BQ96DA2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 AC087239.1-201ENST00000622671 572 ntBASIC18.35■□□□□ 0.53
RAB39BQ96DA2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB39BQ96DA2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 AC137767.1-201ENST00000602918 1920 ntBASIC18.34■□□□□ 0.53
RAB39BQ96DA2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 AL162430.1-201ENST00000480705 870 ntBASIC18.34■□□□□ 0.53
RAB39BQ96DA2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB39BQ96DA2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB39BQ96DA2 AL353803.4-201ENST00000565882 1934 ntBASIC18.33■□□□□ 0.53
RAB39BQ96DA2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB39BQ96DA2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB39BQ96DA2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB39BQ96DA2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB39BQ96DA2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 AC123595.1-201ENST00000440769 1046 ntBASIC18.33■□□□□ 0.52
RAB39BQ96DA2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB39BQ96DA2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 AC007375.3-201ENST00000600936 2314 ntBASIC18.32■□□□□ 0.52
RAB39BQ96DA2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms