Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.06■□□□□ 0.64
APH1AQ96BI3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.06■□□□□ 0.64
APH1AQ96BI3 MIR5787-201ENST00000611784 55 ntBASIC19.06■□□□□ 0.64
APH1AQ96BI3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.06■□□□□ 0.64
APH1AQ96BI3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 AC009237.3-201ENST00000393279 1427 ntBASIC19.06■□□□□ 0.64
APH1AQ96BI3 AC233723.2-201ENST00000623798 2106 ntBASIC19.06■□□□□ 0.64
APH1AQ96BI3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APH1AQ96BI3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.06■□□□□ 0.64
APH1AQ96BI3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APH1AQ96BI3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.05■□□□□ 0.64
APH1AQ96BI3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
APH1AQ96BI3 AC080038.3-201ENST00000623346 1952 ntBASIC19.04■□□□□ 0.64
APH1AQ96BI3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.04■□□□□ 0.64
APH1AQ96BI3 AC087623.3-201ENST00000607047 1098 ntBASIC19.04■□□□□ 0.64
APH1AQ96BI3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APH1AQ96BI3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
APH1AQ96BI3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APH1AQ96BI3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
APH1AQ96BI3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APH1AQ96BI3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APH1AQ96BI3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
APH1AQ96BI3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.02■□□□□ 0.64
APH1AQ96BI3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
APH1AQ96BI3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
APH1AQ96BI3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
APH1AQ96BI3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
APH1AQ96BI3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.02■□□□□ 0.63
APH1AQ96BI3 AC012676.1-201ENST00000574705 1949 ntBASIC19.02■□□□□ 0.63
APH1AQ96BI3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.63
APH1AQ96BI3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
APH1AQ96BI3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.01■□□□□ 0.63
APH1AQ96BI3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.01■□□□□ 0.63
APH1AQ96BI3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APH1AQ96BI3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms