Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOBEC3DQ96AK3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 TSPY26P-201ENST00000476365 1326 ntBASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOBEC3DQ96AK3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
APOBEC3DQ96AK3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 AC142381.2-201ENST00000566120 298 ntBASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOBEC3DQ96AK3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOBEC3DQ96AK3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 AC005837.3-201ENST00000612163 286 ntBASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOBEC3DQ96AK3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 FAM99A-202ENST00000538190 1989 ntBASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 SMUG1P1-201ENST00000590640 811 ntBASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOBEC3DQ96AK3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 AP004607.7-201ENST00000527152 1677 ntBASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.6■□□□□ 0.57
APOBEC3DQ96AK3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms