Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 IGHV3-19-201ENST00000521488 291 ntBASIC20.72■□□□□ 0.91
UBE2E3Q969T4 AC133561.4-201ENST00000566112 224 ntBASIC20.72■□□□□ 0.91
UBE2E3Q969T4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 AL139246.5-201ENST00000606645 996 ntBASIC20.71■□□□□ 0.91
UBE2E3Q969T4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 LINC00565-201ENST00000562710 2331 ntBASIC20.71■□□□□ 0.91
UBE2E3Q969T4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2E3Q969T4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.91
UBE2E3Q969T4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 AC099791.1-201ENST00000416440 715 ntBASIC20.7■□□□□ 0.9
UBE2E3Q969T4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE2E3Q969T4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.69■□□□□ 0.9
UBE2E3Q969T4 AP001330.3-201ENST00000520123 633 ntBASIC20.69■□□□□ 0.9
UBE2E3Q969T4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 RASA4CP-201ENST00000424092 1398 ntBASIC20.69■□□□□ 0.9
UBE2E3Q969T4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2E3Q969T4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 FAM99A-202ENST00000538190 1989 ntBASIC20.68■□□□□ 0.9
UBE2E3Q969T4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2E3Q969T4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2E3Q969T4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2E3Q969T4 AC091305.1-201ENST00000479476 895 ntBASIC20.67■□□□□ 0.9
UBE2E3Q969T4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.67■□□□□ 0.9
UBE2E3Q969T4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.67■□□□□ 0.9
UBE2E3Q969T4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2E3Q969T4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 MIR939-201ENST00000401314 82 ntBASIC20.66■□□□□ 0.9
UBE2E3Q969T4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
UBE2E3Q969T4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms