Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 AC104771.1-201ENST00000603335 964 ntBASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 AC137767.1-201ENST00000602918 1920 ntBASIC23.57■■□□□ 1.36
TMEM40Q8WWA1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 AC006970.2-201ENST00000450065 779 ntBASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.56■■□□□ 1.36
TMEM40Q8WWA1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 MIR663A-201ENST00000385250 93 ntBASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 AP001160.3-201ENST00000601484 763 ntBASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TMEM40Q8WWA1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
TMEM40Q8WWA1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 NCF1B-203ENST00000435988 1254 ntBASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 DUX4L16-201ENST00000555130 1264 ntBASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.53■■□□□ 1.36
TMEM40Q8WWA1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 AL050303.2-201ENST00000619798 666 ntBASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TMEM40Q8WWA1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TMEM40Q8WWA1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 AP006587.3-201ENST00000525742 1516 ntBASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 MYCNOS-205ENST00000641950 531 ntBASIC23.5■■□□□ 1.35
TMEM40Q8WWA1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms