Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCFD1Q8WVM8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 AC010542.4-201ENST00000563151 1910 ntBASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 AC091305.1-201ENST00000479476 895 ntBASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.75■■□□□ 1.39
SCFD1Q8WVM8 AC026471.6-201ENST00000622954 1905 ntBASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 FBXW4P1-201ENST00000426721 2239 ntBASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 SMUG1P1-201ENST00000590640 811 ntBASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 TSPY26P-201ENST00000476365 1326 ntBASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.74■■□□□ 1.39
SCFD1Q8WVM8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCFD1Q8WVM8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCFD1Q8WVM8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 AC005837.3-201ENST00000612163 286 ntBASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCFD1Q8WVM8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.7■■□□□ 1.39
SCFD1Q8WVM8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.7■■□□□ 1.39
SCFD1Q8WVM8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SCFD1Q8WVM8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SCFD1Q8WVM8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.7■■□□□ 1.38
SCFD1Q8WVM8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 MIR638-201ENST00000385237 100 ntBASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 AP004607.7-201ENST00000527152 1677 ntBASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SCFD1Q8WVM8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCFD1Q8WVM8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms