Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHD5Q8TDI0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.95■■□□□ 1.11
CHD5Q8TDI0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CHD5Q8TDI0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 KRT18P5-201ENST00000436075 1291 ntBASIC21.94■■□□□ 1.1
CHD5Q8TDI0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 KRT18P61-201ENST00000585825 1298 ntBASIC21.94■■□□□ 1.1
CHD5Q8TDI0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHD5Q8TDI0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHD5Q8TDI0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.92■■□□□ 1.1
CHD5Q8TDI0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 AL117328.2-201ENST00000624617 1940 ntBASIC21.91■■□□□ 1.1
CHD5Q8TDI0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHD5Q8TDI0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHD5Q8TDI0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.89■■□□□ 1.09
CHD5Q8TDI0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 AC026471.6-201ENST00000622954 1905 ntBASIC21.88■■□□□ 1.09
CHD5Q8TDI0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CHD5Q8TDI0 KRT87P-202ENST00000534226 1464 ntBASIC21.88■■□□□ 1.09
CHD5Q8TDI0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms