Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 AC092171.4-201ENST00000609130 632 ntBASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZFP28Q8NHY6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZFP28Q8NHY6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZFP28Q8NHY6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 AC099791.2-201ENST00000605725 427 ntBASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZFP28Q8NHY6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 AL391422.3-201ENST00000603791 2761 ntBASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFP28Q8NHY6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP28Q8NHY6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP28Q8NHY6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP28Q8NHY6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZFP28Q8NHY6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.64■□□□□ 0.9
ZFP28Q8NHY6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 pRNA.6-201ENST00000610482 90 ntBASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 pRNA.5-201ENST00000612139 90 ntBASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 pRNA.11-201ENST00000618423 90 ntBASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 pRNA.13-201ENST00000619112 90 ntBASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFP28Q8NHY6 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
ZFP28Q8NHY6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFP28Q8NHY6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP28Q8NHY6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP28Q8NHY6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFP28Q8NHY6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms