Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.26■■□□□ 1.31
LRRC43Q8N309 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.26■■□□□ 1.31
LRRC43Q8N309 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.26■■□□□ 1.31
LRRC43Q8N309 UBE2DNL-204ENST00000602536 740 ntBASIC23.26■■□□□ 1.31
LRRC43Q8N309 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC43Q8N309 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
LRRC43Q8N309 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC43Q8N309 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 AC079089.2-201ENST00000531211 1277 ntBASIC23.25■■□□□ 1.31
LRRC43Q8N309 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.25■■□□□ 1.31
LRRC43Q8N309 AC231657.2-201ENST00000624556 255 ntBASIC23.25■■□□□ 1.31
LRRC43Q8N309 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 AC055733.4-201ENST00000638462 1354 ntBASIC23.25■■□□□ 1.31
LRRC43Q8N309 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC43Q8N309 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.24■■□□□ 1.31
LRRC43Q8N309 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC43Q8N309 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC43Q8N309 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC43Q8N309 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC43Q8N309 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRC43Q8N309 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 AP001160.3-201ENST00000601484 763 ntBASIC23.23■■□□□ 1.31
LRRC43Q8N309 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRC43Q8N309 MYCNOS-205ENST00000641950 531 ntBASIC23.23■■□□□ 1.31
LRRC43Q8N309 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LRRC43Q8N309 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC43Q8N309 DUSP8P5-201ENST00000422884 1815 ntBASIC23.22■■□□□ 1.31
LRRC43Q8N309 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC43Q8N309 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC43Q8N309 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC43Q8N309 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.22■■□□□ 1.31
LRRC43Q8N309 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.22■■□□□ 1.31
LRRC43Q8N309 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRC43Q8N309 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
LRRC43Q8N309 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LRRC43Q8N309 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.21■■□□□ 1.31
LRRC43Q8N309 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.21■■□□□ 1.31
LRRC43Q8N309 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 DUX4L16-201ENST00000555130 1264 ntBASIC23.21■■□□□ 1.31
LRRC43Q8N309 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.21■■□□□ 1.31
LRRC43Q8N309 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.21■■□□□ 1.31
LRRC43Q8N309 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRC43Q8N309 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC43Q8N309 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC43Q8N309 AC007322.1-201ENST00000426983 750 ntBASIC23.2■■□□□ 1.3
LRRC43Q8N309 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 AL121832.2-201ENST00000610979 668 ntBASIC23.2■■□□□ 1.3
LRRC43Q8N309 AL050303.2-201ENST00000619798 666 ntBASIC23.2■■□□□ 1.3
LRRC43Q8N309 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.2■■□□□ 1.3
LRRC43Q8N309 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC43Q8N309 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRC43Q8N309 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC43Q8N309 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC43Q8N309 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRC43Q8N309 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LRRC43Q8N309 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
LRRC43Q8N309 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 AC005181.1-201ENST00000604782 1256 ntBASIC23.19■■□□□ 1.3
LRRC43Q8N309 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRC43Q8N309 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms