Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TRIM59Q8IWR1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 AC244015.2-201ENST00000616358 1861 ntBASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM59Q8IWR1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 BX842568.3-201ENST00000418104 571 ntBASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 AC024257.2-201ENST00000549699 147 ntBASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 AC026310.3-201ENST00000625186 2373 ntBASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM59Q8IWR1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.45■■□□□ 1.35
TRIM59Q8IWR1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRIM59Q8IWR1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 AL136162.1-201ENST00000607711 1078 ntBASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM59Q8IWR1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM59Q8IWR1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 AC133561.4-201ENST00000566112 224 ntBASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.43■■□□□ 1.34
TRIM59Q8IWR1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM59Q8IWR1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 AC135279.3-201ENST00000610945 1311 ntBASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRIM59Q8IWR1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM59Q8IWR1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms