Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.18■□□□□ 0.98
APLFQ8IW19 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.18■□□□□ 0.98
APLFQ8IW19 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.18■□□□□ 0.98
APLFQ8IW19 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.18■□□□□ 0.98
APLFQ8IW19 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.18■□□□□ 0.98
APLFQ8IW19 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APLFQ8IW19 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.18■□□□□ 0.98
APLFQ8IW19 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.17■□□□□ 0.98
APLFQ8IW19 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
APLFQ8IW19 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.17■□□□□ 0.98
APLFQ8IW19 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 IRS3P-201ENST00000223076 1006 ntBASIC21.17■□□□□ 0.98
APLFQ8IW19 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 AC136469.2-201ENST00000623944 1028 ntBASIC21.17■□□□□ 0.98
APLFQ8IW19 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 C17orf82-201ENST00000623772 1530 ntBASIC21.17■□□□□ 0.98
APLFQ8IW19 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.17■□□□□ 0.98
APLFQ8IW19 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APLFQ8IW19 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APLFQ8IW19 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APLFQ8IW19 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APLFQ8IW19 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APLFQ8IW19 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.16■□□□□ 0.98
APLFQ8IW19 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.16■□□□□ 0.98
APLFQ8IW19 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.16■□□□□ 0.98
APLFQ8IW19 AC008764.7-201ENST00000593779 1081 ntBASIC21.16■□□□□ 0.98
APLFQ8IW19 AC087623.3-201ENST00000607047 1098 ntBASIC21.16■□□□□ 0.98
APLFQ8IW19 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
APLFQ8IW19 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APLFQ8IW19 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
APLFQ8IW19 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
APLFQ8IW19 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 AC099791.1-201ENST00000416440 715 ntBASIC21.15■□□□□ 0.98
APLFQ8IW19 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.15■□□□□ 0.98
APLFQ8IW19 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.15■□□□□ 0.98
APLFQ8IW19 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.15■□□□□ 0.98
APLFQ8IW19 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.15■□□□□ 0.98
APLFQ8IW19 LINC01521-201ENST00000504184 1943 ntBASIC21.15■□□□□ 0.98
APLFQ8IW19 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APLFQ8IW19 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
APLFQ8IW19 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
APLFQ8IW19 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.14■□□□□ 0.97
APLFQ8IW19 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APLFQ8IW19 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.13■□□□□ 0.97
APLFQ8IW19 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
APLFQ8IW19 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 AL162430.1-201ENST00000480705 870 ntBASIC21.13■□□□□ 0.97
APLFQ8IW19 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.13■□□□□ 0.97
APLFQ8IW19 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
APLFQ8IW19 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
APLFQ8IW19 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.13■□□□□ 0.97
APLFQ8IW19 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
APLFQ8IW19 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
APLFQ8IW19 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
APLFQ8IW19 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
APLFQ8IW19 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
APLFQ8IW19 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
APLFQ8IW19 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.12■□□□□ 0.97
APLFQ8IW19 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.12■□□□□ 0.97
APLFQ8IW19 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
APLFQ8IW19 AC092053.2-201ENST00000640557 1818 ntBASIC21.12■□□□□ 0.97
APLFQ8IW19 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.12■□□□□ 0.97
APLFQ8IW19 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APLFQ8IW19 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APLFQ8IW19 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APLFQ8IW19 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APLFQ8IW19 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APLFQ8IW19 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms