Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 CA15P2-201ENST00000611168 834 ntBASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 RNF165-205ENST00000588679 2904 ntBASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 GUSBP5-201ENST00000418136 578 ntBASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 AC092171.4-201ENST00000609130 632 ntBASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 AC133637.1-201ENST00000624115 1537 ntBASIC13.8□□□□□ -0.2
MRPL55Q7Z7F7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 FBXW4P1-201ENST00000426721 2239 ntBASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 pRNA.6-201ENST00000610482 90 ntBASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 pRNA.5-201ENST00000612139 90 ntBASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 pRNA.11-201ENST00000618423 90 ntBASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 pRNA.13-201ENST00000619112 90 ntBASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL55Q7Z7F7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 SRD5A1P1-201ENST00000442297 786 ntBASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.78□□□□□ -0.2
MRPL55Q7Z7F7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MRPL55Q7Z7F7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MRPL55Q7Z7F7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms