Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST2H3AQ71DI3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST2H3AQ71DI3 AL024507.2-201ENST00000606070 2574 ntBASIC18.89■□□□□ 0.62
HIST2H3AQ71DI3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIST2H3AQ71DI3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.89■□□□□ 0.62
HIST2H3AQ71DI3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
HIST2H3AQ71DI3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 FAM99A-202ENST00000538190 1989 ntBASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 AC135279.3-201ENST00000610945 1311 ntBASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST2H3AQ71DI3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 AC133561.4-201ENST00000566112 224 ntBASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 AC233992.3-201ENST00000607491 485 ntBASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST2H3AQ71DI3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 AC010542.4-201ENST00000563151 1910 ntBASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST2H3AQ71DI3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 AC096631.2-201ENST00000436136 790 ntBASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST2H3AQ71DI3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 AC106739.1-201ENST00000617035 715 ntBASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HIST2H3AQ71DI3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms