Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RPGRIP1LQ68CZ1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 AC010536.3-201ENST00000620306 533 ntBASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RPGRIP1LQ68CZ1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC30.82■■■□□ 2.52
RPGRIP1LQ68CZ1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.82■■■□□ 2.52
RPGRIP1LQ68CZ1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RPGRIP1LQ68CZ1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.82■■■□□ 2.52
RPGRIP1LQ68CZ1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.82■■■□□ 2.52
RPGRIP1LQ68CZ1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RPGRIP1LQ68CZ1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RPGRIP1LQ68CZ1 AC133552.2-202ENST00000575694 574 ntBASIC30.81■■■□□ 2.52
RPGRIP1LQ68CZ1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
RPGRIP1LQ68CZ1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 AC053503.5-201ENST00000601508 636 ntBASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.79■■■□□ 2.52
RPGRIP1LQ68CZ1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 AP006587.3-201ENST00000525742 1516 ntBASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC30.78■■■□□ 2.52
RPGRIP1LQ68CZ1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPGRIP1LQ68CZ1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
RPGRIP1LQ68CZ1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
RPGRIP1LQ68CZ1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.52
RPGRIP1LQ68CZ1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.76■■■□□ 2.52
RPGRIP1LQ68CZ1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RPGRIP1LQ68CZ1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
RPGRIP1LQ68CZ1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RPGRIP1LQ68CZ1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.76■■■□□ 2.51
RPGRIP1LQ68CZ1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.76■■■□□ 2.51
RPGRIP1LQ68CZ1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RPGRIP1LQ68CZ1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 AC073210.2-201ENST00000430369 194 ntBASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 CD99P1-205ENST00000527459 561 ntBASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 AL138781.1-201ENST00000566567 1274 ntBASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RPGRIP1LQ68CZ1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RPGRIP1LQ68CZ1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 AF201337.1-201ENST00000520239 748 ntBASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC30.73■■■□□ 2.51
RPGRIP1LQ68CZ1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms