Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.49■■□□□ 1.99
RC3H1Q5TC82 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.48■■□□□ 1.99
RC3H1Q5TC82 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
RC3H1Q5TC82 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 EEF1DP3-203ENST00000566025 782 ntBASIC27.47■■□□□ 1.99
RC3H1Q5TC82 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RC3H1Q5TC82 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 CYP2T1P-201ENST00000432607 1285 ntBASIC27.46■■□□□ 1.99
RC3H1Q5TC82 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.46■■□□□ 1.99
RC3H1Q5TC82 ABCB10P4-201ENST00000566803 2184 ntBASIC27.46■■□□□ 1.99
RC3H1Q5TC82 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.99
RC3H1Q5TC82 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RC3H1Q5TC82 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.45■■□□□ 1.99
RC3H1Q5TC82 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 AL512625.2-201ENST00000417533 625 ntBASIC27.45■■□□□ 1.98
RC3H1Q5TC82 OR10C1-204ENST00000622521 1039 ntBASIC27.45■■□□□ 1.98
RC3H1Q5TC82 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 AP004607.7-201ENST00000527152 1677 ntBASIC27.45■■□□□ 1.98
RC3H1Q5TC82 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.45■■□□□ 1.98
RC3H1Q5TC82 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.44■■□□□ 1.98
RC3H1Q5TC82 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RC3H1Q5TC82 MKRN4P-201ENST00000444706 1521 ntBASIC27.44■■□□□ 1.98
RC3H1Q5TC82 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.44■■□□□ 1.98
RC3H1Q5TC82 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 PRORSD1P-201ENST00000295112 541 ntBASIC27.43■■□□□ 1.98
RC3H1Q5TC82 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RC3H1Q5TC82 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 KRT18P29-201ENST00000397031 1267 ntBASIC27.42■■□□□ 1.98
RC3H1Q5TC82 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 RNA5SP413-201ENST00000516373 109 ntBASIC27.42■■□□□ 1.98
RC3H1Q5TC82 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 AC053503.5-201ENST00000601508 636 ntBASIC27.42■■□□□ 1.98
RC3H1Q5TC82 AC092118.2-201ENST00000613495 667 ntBASIC27.42■■□□□ 1.98
RC3H1Q5TC82 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
RC3H1Q5TC82 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.41■■□□□ 1.98
RC3H1Q5TC82 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RC3H1Q5TC82 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.4■■□□□ 1.98
RC3H1Q5TC82 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RC3H1Q5TC82 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms