Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDCD4Q53EL6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDCD4Q53EL6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDCD4Q53EL6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDCD4Q53EL6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 AC133637.1-201ENST00000624115 1537 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 AL451085.2-201ENST00000605085 799 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 MIR6724-1-201ENST00000616420 92 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 MIR6724-2-201ENST00000616483 92 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 MIR6724-4-201ENST00000617390 92 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 MIR6724-3-201ENST00000622482 92 ntBASIC20.63■□□□□ 0.89
PDCD4Q53EL6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDCD4Q53EL6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDCD4Q53EL6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 AC073130.3-201ENST00000624389 2278 ntBASIC20.61■□□□□ 0.89
PDCD4Q53EL6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 OR7E47P-201ENST00000546390 1422 ntBASIC20.61■□□□□ 0.89
PDCD4Q53EL6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.61■□□□□ 0.89
PDCD4Q53EL6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PDCD4Q53EL6 AC026471.6-201ENST00000622954 1905 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms