Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ENOSF1-205ENST00000578647 706 ntTSL 36.27□□□□□ -1.419e-7■■■□□ 18.6
SRSF1Q07955 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.046e-8■■■□□ 18.6
SRSF1Q07955 PRSS21-205ENST00000571141 484 ntTSL 219.21■□□□□ 0.676e-8■■■□□ 18.6
SRSF1Q07955 PRSS21-203ENST00000570594 809 ntTSL 318.53■□□□□ 0.566e-8■■■□□ 18.6
SRSF1Q07955 PRSS21-207ENST00000574813 873 ntTSL 317.32■□□□□ 0.366e-8■■■□□ 18.6
SRSF1Q07955 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.336e-8■■■□□ 18.6
SRSF1Q07955 PRSS21-204ENST00000570629 626 ntTSL 211.5□□□□□ -0.576e-8■■■□□ 18.6
SRSF1Q07955 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.478e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-203ENST00000475636 418 ntTSL 1 (best)7.83□□□□□ -1.168e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-206ENST00000484691 488 ntTSL 36.14□□□□□ -1.438e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-202ENST00000466758 2390 ntTSL 1 (best)5.82□□□□□ -1.488e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-208ENST00000491699 1660 ntTSL 1 (best)4.65□□□□□ -1.668e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-207ENST00000490303 2290 ntTSL 24.26□□□□□ -1.738e-10■■■□□ 18.6
SRSF1Q07955 ATP11B-210ENST00000498086 3259 ntTSL 53.22□□□□□ -1.898e-10■■■□□ 18.6
SRSF1Q07955 LUC7L-212ENST00000443357 833 ntTSL 25.35□□□□□ -1.552e-8■■■□□ 18.6
SRSF1Q07955 KDM6A-207ENST00000475233 612 ntTSL 517.93■□□□□ 0.462e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.46□□□□□ -0.12e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.11□□□□□ -0.152e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.97□□□□□ -0.172e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.89□□□□□ -0.192e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC9.97□□□□□ -0.812e-6■■■□□ 18.6
SRSF1Q07955 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.832e-6■■■□□ 18.6
SRSF1Q07955 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.474e-6■■■□□ 18.6
SRSF1Q07955 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.624e-6■■■□□ 18.6
SRSF1Q07955 ABAT-209ENST00000564714 466 ntTSL 312.28□□□□□ -0.444e-16■■■□□ 18.6
SRSF1Q07955 ABAT-207ENST00000563992 1870 ntTSL 211.35□□□□□ -0.594e-16■■■□□ 18.6
SRSF1Q07955 ARHGEF1-223ENST00000617585 737 ntTSL 221.25■□□□□ 0.993e-11■■■□□ 18.6
SRSF1Q07955 ARHGEF1-217ENST00000598812 588 ntTSL 519.09■□□□□ 0.653e-11■■■□□ 18.6
SRSF1Q07955 GSE1-205ENST00000412692 6625 ntTSL 512.77□□□□□ -0.374e-11■■■□□ 18.6
SRSF1Q07955 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.624e-11■■■□□ 18.6
SRSF1Q07955 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.684e-11■■■□□ 18.6
SRSF1Q07955 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.714e-11■■■□□ 18.6
SRSF1Q07955 OAZ1-209ENST00000592787 857 ntTSL 215.27■□□□□ 0.043e-10■■■□□ 18.6
SRSF1Q07955 FTX-211ENST00000603672 1077 ntTSL 513.29□□□□□ -0.284e-8■■■□□ 18.6
SRSF1Q07955 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.91□□□□□ -0.344e-8■■■□□ 18.6
SRSF1Q07955 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.33□□□□□ -1.084e-8■■■□□ 18.6
SRSF1Q07955 FTX-209ENST00000602812 2356 ntTSL 1 (best)7.97□□□□□ -1.134e-8■■■□□ 18.6
SRSF1Q07955 FTX-206ENST00000602420 751 ntTSL 35.89□□□□□ -1.474e-8■■■□□ 18.6
SRSF1Q07955 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.88□□□□□ -1.794e-8■■■□□ 18.6
SRSF1Q07955 COL9A2-204ENST00000427563 548 ntTSL 318.14■□□□□ 0.492e-8■■■□□ 18.6
SRSF1Q07955 COL9A2-206ENST00000466267 835 ntTSL 518.14■□□□□ 0.492e-8■■■□□ 18.6
SRSF1Q07955 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.62□□□□□ -0.552e-14■■■□□ 18.5
SRSF1Q07955 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.7□□□□□ -0.72e-14■■■□□ 18.5
SRSF1Q07955 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.52□□□□□ -0.722e-14■■■□□ 18.5
SRSF1Q07955 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC9.67□□□□□ -0.862e-14■■■□□ 18.5
SRSF1Q07955 ACIN1-206ENST00000473758 3540 ntTSL 1 (best)8.55□□□□□ -1.042e-14■■■□□ 18.5
SRSF1Q07955 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.75e-11■■■□□ 18.5
SRSF1Q07955 PSMG1-203ENST00000411828 959 ntTSL 319.38■□□□□ 0.695e-11■■■□□ 18.5
SRSF1Q07955 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.45■□□□□ 0.545e-11■■■□□ 18.5
SRSF1Q07955 ETF1-206ENST00000507939 713 ntTSL 517.79■□□□□ 0.445e-11■■■□□ 18.5
SRSF1Q07955 ETF1-209ENST00000572514 990 ntTSL 517.11■□□□□ 0.335e-11■■■□□ 18.5
SRSF1Q07955 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.07■□□□□ 0.321e-6■■■□□ 18.5
SRSF1Q07955 PSMG1-204ENST00000431628 760 ntTSL 1 (best)16.02■□□□□ 0.165e-11■■■□□ 18.5
SRSF1Q07955 RTEL1-202ENST00000356810 1339 ntTSL 1 (best)14.86□□□□□ -0.032e-9■■■□□ 18.5
SRSF1Q07955 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.331e-6■■■□□ 18.5
SRSF1Q07955 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.53□□□□□ -0.41e-6■■■□□ 18.5
SRSF1Q07955 RTEL1-207ENST00000463361 575 ntTSL 412.45□□□□□ -0.422e-9■■■□□ 18.5
SRSF1Q07955 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC9.46□□□□□ -0.95e-11■■■□□ 18.5
SRSF1Q07955 ETF1-201ENST00000360541 3742 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.035e-11■■■□□ 18.5
SRSF1Q07955 ETF1-207ENST00000512198 745 ntTSL 57.63□□□□□ -1.195e-11■■■□□ 18.5
SRSF1Q07955 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.635e-6■■■□□ 18.5
SRSF1Q07955 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.43■□□□□ 0.384e-6■■■□□ 18.5
SRSF1Q07955 FIS1-206ENST00000473527 1005 ntTSL 1 (best)17.11■□□□□ 0.334e-6■■■□□ 18.5
SRSF1Q07955 FIS1-209ENST00000482199 731 ntTSL 316.65■□□□□ 0.264e-6■■■□□ 18.5
SRSF1Q07955 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.65■□□□□ 0.264e-6■■■□□ 18.5
SRSF1Q07955 FIS1-208ENST00000480497 530 ntTSL 316.65■□□□□ 0.264e-6■■■□□ 18.5
SRSF1Q07955 TACC1-216ENST00000521642 493 ntTSL 1 (best)16.52■□□□□ 0.244e-6■■■□□ 18.5
SRSF1Q07955 TACC1-212ENST00000521050 491 ntTSL 1 (best)16.2■□□□□ 0.184e-6■■■□□ 18.5
SRSF1Q07955 FIS1-204ENST00000449367 745 ntTSL 215.16■□□□□ 0.024e-6■■■□□ 18.5
SRSF1Q07955 PCK1-203ENST00000470051 409 ntTSL 214.64□□□□□ -0.074e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.47□□□□□ -0.094e-6■■■□□ 18.5
SRSF1Q07955 FIS1-202ENST00000435848 692 ntTSL 514.09□□□□□ -0.154e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.8□□□□□ -0.24e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.7□□□□□ -0.224e-6■■■□□ 18.5
SRSF1Q07955 TACC1-222ENST00000522752 944 ntTSL 1 (best)13.03□□□□□ -0.324e-6■■■□□ 18.5
SRSF1Q07955 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.344e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-210ENST00000474208 308 ntTSL 512.36□□□□□ -0.434e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.454e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-215ENST00000489068 442 ntTSL 312.15□□□□□ -0.464e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.65□□□□□ -0.554e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC11.15□□□□□ -0.634e-6■■■□□ 18.5
SRSF1Q07955 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.08□□□□□ -0.644e-6■■■□□ 18.5
SRSF1Q07955 PCK1-206ENST00000498194 783 ntTSL 210.9□□□□□ -0.664e-6■■■□□ 18.5
SRSF1Q07955 TACC1-223ENST00000522904 1724 ntTSL 510.61□□□□□ -0.714e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC10.45□□□□□ -0.744e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-208ENST00000372826 854 ntTSL 59.52□□□□□ -0.894e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-212ENST00000479873 1178 ntTSL 29.5□□□□□ -0.894e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-209ENST00000465761 801 ntTSL 29.39□□□□□ -0.914e-6■■■□□ 18.5
SRSF1Q07955 FIS1-205ENST00000463406 527 ntTSL 39.11□□□□□ -0.954e-6■■■□□ 18.5
SRSF1Q07955 PCK1-202ENST00000467047 5074 ntTSL 1 (best)8.81□□□□□ -14e-6■■■□□ 18.5
SRSF1Q07955 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC8.43□□□□□ -1.064e-6■■■□□ 18.5
SRSF1Q07955 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.084e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC7.85□□□□□ -1.154e-6■■■□□ 18.5
SRSF1Q07955 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.334e-6■■■□□ 18.5
SRSF1Q07955 PABPC1L-206ENST00000372822 536 ntTSL 56.48□□□□□ -1.374e-6■■■□□ 18.5
SRSF1Q07955 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.34□□□□□ -1.394e-6■■■□□ 18.5
SRSF1Q07955 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.34□□□□□ -1.394e-6■■■□□ 18.5
SRSF1Q07955 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.62■□□□□ 0.091e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.6■□□□□ 0.091e-9■■■□□ 18.5
SRSF1Q07955 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.65□□□□□ -0.061e-9■■■□□ 18.5
Retrieved 100 of 14,836 protein–RNA pairs in 65.3 ms