Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YIL171W-AYIL171W-A 453 nt2.79□□□□□ -1.96
SMD1Q02260 YIR023C-AYIR023C-A 324 nt2.79□□□□□ -1.96
SMD1Q02260 YJL220WYJL220W 453 nt2.79□□□□□ -1.96
SMD1Q02260 YJR038CYJR038C 363 nt2.79□□□□□ -1.96
SMD1Q02260 RSM26YJR101W 801 nt2.79□□□□□ -1.96
SMD1Q02260 PER33YLR064W 822 nt2.79□□□□□ -1.96
SMD1Q02260 YLR285C-AYLR285C-A 171 nt2.79□□□□□ -1.96
SMD1Q02260 RRP36YOR287C 903 nt2.79□□□□□ -1.96
SMD1Q02260 YPL162CYPL162C 822 nt2.79□□□□□ -1.96
SMD1Q02260 FYV5YCL058C 459 nt2.79□□□□□ -1.96
SMD1Q02260 ETP1YHL010C 1758 nt2.79□□□□□ -1.96
SMD1Q02260 FUN12YAL035W 3009 nt2.79□□□□□ -1.96
SMD1Q02260 YGL140CYGL140C 3660 nt2.79□□□□□ -1.96
SMD1Q02260 YEH2YLR020C 1617 nt2.79□□□□□ -1.96
SMD1Q02260 RPN2YIL075C 2838 nt2.78□□□□□ -1.96
SMD1Q02260 RSC58YLR033W 1509 nt2.78□□□□□ -1.96
SMD1Q02260 MLH2YLR035C 2088 nt2.78□□□□□ -1.96
SMD1Q02260 DAP2YHR028C 2457 nt2.78□□□□□ -1.96
SMD1Q02260 BIK1YCL029C 1323 nt2.78□□□□□ -1.96
SMD1Q02260 SNU23YDL098C 585 nt2.78□□□□□ -1.96
SMD1Q02260 RAD55YDR076W 1221 nt2.78□□□□□ -1.96
SMD1Q02260 YDR246W-AYDR246W-A 201 nt2.78□□□□□ -1.96
SMD1Q02260 STE14YDR410C 720 nt2.78□□□□□ -1.96
SMD1Q02260 YHR173CYHR173C 339 nt2.78□□□□□ -1.96
SMD1Q02260 YKE4YIL023C 1041 nt2.78□□□□□ -1.96
SMD1Q02260 YJR128WYJR128W 360 nt2.78□□□□□ -1.96
SMD1Q02260 YKT6YKL196C 603 nt2.78□□□□□ -1.96
SMD1Q02260 YLR364C-AYLR364C-A 123 nt2.78□□□□□ -1.96
SMD1Q02260 YML094C-AYML094C-A 402 nt2.78□□□□□ -1.96
SMD1Q02260 UTP23YOR004W 765 nt2.78□□□□□ -1.96
SMD1Q02260 IRC13YOR235W 315 nt2.78□□□□□ -1.96
SMD1Q02260 YOR379CYOR379C 339 nt2.78□□□□□ -1.96
SMD1Q02260 RAD4YER162C 2265 nt2.78□□□□□ -1.96
SMD1Q02260 SAF1YBR280C 1914 nt2.78□□□□□ -1.97
SMD1Q02260 SWH1YAR042W 3567 nt2.77□□□□□ -1.97
SMD1Q02260 ACK1YDL203C 1872 nt2.77□□□□□ -1.97
SMD1Q02260 NCR1YPL006W 3513 nt2.77□□□□□ -1.97
SMD1Q02260 NUP85YJR042W 2235 nt2.77□□□□□ -1.97
SMD1Q02260 YNR066CYNR066C 1311 nt2.77□□□□□ -1.97
SMD1Q02260 TRM11YOL124C 1302 nt2.77□□□□□ -1.97
SMD1Q02260 SPC105YGL093W 2754 nt2.77□□□□□ -1.97
SMD1Q02260 TSC13YDL015C 933 nt2.77□□□□□ -1.97
SMD1Q02260 YDR464C-AYDR464C-A 189 nt2.77□□□□□ -1.97
SMD1Q02260 YDR535CYDR535C 501 nt2.77□□□□□ -1.97
SMD1Q02260 YER034WYER034W 558 nt2.77□□□□□ -1.97
SMD1Q02260 VFA1YER128W 612 nt2.77□□□□□ -1.97
SMD1Q02260 REC104YHR157W 549 nt2.77□□□□□ -1.97
SMD1Q02260 PFS1YHR185C 714 nt2.77□□□□□ -1.97
SMD1Q02260 GTT1YIR038C 705 nt2.77□□□□□ -1.97
SMD1Q02260 RPS4AYJR145C 786 nt2.77□□□□□ -1.97
SMD1Q02260 BOS1YLR078C 735 nt2.77□□□□□ -1.97
SMD1Q02260 ERV41YML067C 1059 nt2.77□□□□□ -1.97
SMD1Q02260 TVP18YMR071C 504 nt2.77□□□□□ -1.97
SMD1Q02260 YBL062WYBL062W 381 nt2.77□□□□□ -1.97
SMD1Q02260 FYV6YNL133C 522 nt2.77□□□□□ -1.97
SMD1Q02260 DCP1YOL149W 696 nt2.77□□□□□ -1.97
SMD1Q02260 UFE1YOR075W 1041 nt2.77□□□□□ -1.97
SMD1Q02260 DSS4YPR017C 432 nt2.77□□□□□ -1.97
SMD1Q02260 IMH1YLR309C 2736 nt2.77□□□□□ -1.97
SMD1Q02260 BYE1YKL005C 1785 nt2.77□□□□□ -1.97
SMD1Q02260 SQS1YNL224C 2304 nt2.76□□□□□ -1.97
SMD1Q02260 YOL019WYOL019W 1656 nt2.76□□□□□ -1.97
SMD1Q02260 YJR061WYJR061W 2808 nt2.76□□□□□ -1.97
SMD1Q02260 ERG5YMR015C 1617 nt2.76□□□□□ -1.97
SMD1Q02260 CUE3YGL110C 1875 nt2.76□□□□□ -1.97
SMD1Q02260 HTD2YHR067W 843 nt2.76□□□□□ -1.97
SMD1Q02260 TRM112YNR046W 408 nt2.76□□□□□ -1.97
SMD1Q02260 YOL162WYOL162W 648 nt2.76□□□□□ -1.97
SMD1Q02260 YBR013CYBR013C 390 nt2.76□□□□□ -1.97
SMD1Q02260 DDP1YOR163W 567 nt2.76□□□□□ -1.97
SMD1Q02260 ATG21YPL100W 1491 nt2.76□□□□□ -1.97
SMD1Q02260 RSF2YJR127C 4143 nt2.76□□□□□ -1.97
SMD1Q02260 ZDS1YMR273C 2748 nt2.76□□□□□ -1.97
SMD1Q02260 SLI1YGR212W 1407 nt2.76□□□□□ -1.97
SMD1Q02260 SPA2YLL021W 4401 nt2.75□□□□□ -1.97
SMD1Q02260 YIG1YPL201C 1386 nt2.75□□□□□ -1.97
SMD1Q02260 PPZ1YML016C 2079 nt2.75□□□□□ -1.97
SMD1Q02260 YDR034C-CYDR034C-C 1317 nt2.75□□□□□ -1.97
SMD1Q02260 YLR410W-AYLR410W-A 1317 nt2.75□□□□□ -1.97
SMD1Q02260 CTM1YHR109W 1758 nt2.75□□□□□ -1.97
SMD1Q02260 MGT1YDL200C 567 nt2.75□□□□□ -1.97
SMD1Q02260 YDR230WYDR230W 348 nt2.75□□□□□ -1.97
SMD1Q02260 YDR355CYDR355C 303 nt2.75□□□□□ -1.97
SMD1Q02260 YER076CYER076C 909 nt2.75□□□□□ -1.97
SMD1Q02260 YGL006W-AYGL006W-A 111 nt2.75□□□□□ -1.97
SMD1Q02260 URA4YLR420W 1095 nt2.75□□□□□ -1.97
SMD1Q02260 MSK1YNL073W 1731 nt2.75□□□□□ -1.97
SMD1Q02260 NRP1YDL167C 2160 nt2.75□□□□□ -1.97
SMD1Q02260 PRM15YMR278W 1869 nt2.75□□□□□ -1.97
SMD1Q02260 BCS1YDR375C 1371 nt2.74□□□□□ -1.97
SMD1Q02260 SUP45YBR143C 1314 nt2.74□□□□□ -1.97
SMD1Q02260 MON1YGL124C 1935 nt2.74□□□□□ -1.97
SMD1Q02260 CPR1YDR155C 489 nt2.74□□□□□ -1.97
SMD1Q02260 YGL108CYGL108C 423 nt2.74□□□□□ -1.97
SMD1Q02260 PEX14YGL153W 1026 nt2.74□□□□□ -1.97
SMD1Q02260 AML1YGR001C 747 nt2.74□□□□□ -1.97
SMD1Q02260 RPS25AYGR027C 327 nt2.74□□□□□ -1.97
SMD1Q02260 YGR270C-AYGR270C-A 219 nt2.74□□□□□ -1.97
SMD1Q02260 tR(ACG)JtR(ACG)J 73 nt2.74□□□□□ -1.97
SMD1Q02260 IRC18YJL037W 675 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms