Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSX2P58304 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
VSX2P58304 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VSX2P58304 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VSX2P58304 KRT18P14-201ENST00000534205 1250 ntBASIC20.59■□□□□ 0.89
VSX2P58304 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
VSX2P58304 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
VSX2P58304 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSX2P58304 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
VSX2P58304 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.58■□□□□ 0.89
VSX2P58304 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.58■□□□□ 0.89
VSX2P58304 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L2-201ENST00000561772 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 TERF1P2-201ENST00000583350 1212 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L6-201ENST00000626483 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L1-201ENST00000627662 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L8-201ENST00000629013 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L3-201ENST00000630187 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L7-201ENST00000630678 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 DUX4L5-201ENST00000630834 1275 ntBASIC20.58■□□□□ 0.89
VSX2P58304 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSX2P58304 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VSX2P58304 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VSX2P58304 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
VSX2P58304 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.58■□□□□ 0.88
VSX2P58304 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VSX2P58304 AP004607.7-201ENST00000527152 1677 ntBASIC20.58■□□□□ 0.88
VSX2P58304 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.57■□□□□ 0.88
VSX2P58304 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VSX2P58304 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.57■□□□□ 0.88
VSX2P58304 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
VSX2P58304 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.57■□□□□ 0.88
VSX2P58304 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VSX2P58304 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSX2P58304 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.56■□□□□ 0.88
VSX2P58304 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 AL162430.1-201ENST00000480705 870 ntBASIC20.56■□□□□ 0.88
VSX2P58304 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.56■□□□□ 0.88
VSX2P58304 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.56■□□□□ 0.88
VSX2P58304 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VSX2P58304 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 AC127496.7-201ENST00000625110 1798 ntBASIC20.56■□□□□ 0.88
VSX2P58304 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.56■□□□□ 0.88
VSX2P58304 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
VSX2P58304 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
VSX2P58304 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSX2P58304 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VSX2P58304 AC080038.3-201ENST00000623346 1952 ntBASIC20.55■□□□□ 0.88
VSX2P58304 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.55■□□□□ 0.88
VSX2P58304 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.55■□□□□ 0.88
VSX2P58304 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VSX2P58304 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSX2P58304 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.55■□□□□ 0.88
VSX2P58304 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.54■□□□□ 0.88
VSX2P58304 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 AC009237.3-201ENST00000393279 1427 ntBASIC20.54■□□□□ 0.88
VSX2P58304 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSX2P58304 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms