Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 CLB5YPR120C 1308 nt3.35□□□□□ -1.87
YNL040WP53960 UTP25YIL091C 2166 nt3.35□□□□□ -1.87
YNL040WP53960 YMR317WYMR317W 3423 nt3.35□□□□□ -1.87
YNL040WP53960 REB1YBR049C 2433 nt3.34□□□□□ -1.87
YNL040WP53960 VFA1YER128W 612 nt3.34□□□□□ -1.87
YNL040WP53960 YGR126WYGR126W 693 nt3.34□□□□□ -1.87
YNL040WP53960 REX3YLR107W 1215 nt3.34□□□□□ -1.87
YNL040WP53960 POS5YPL188W 1245 nt3.34□□□□□ -1.87
YNL040WP53960 GCN1YGL195W 8019 nt3.33□□□□□ -1.88
YNL040WP53960 PDX1YGR193C 1233 nt3.33□□□□□ -1.88
YNL040WP53960 RUF21RUF21 707 nt3.33□□□□□ -1.88
YNL040WP53960 YNL013CYNL013C 378 nt3.33□□□□□ -1.88
YNL040WP53960 HRT1YOL133W 366 nt3.33□□□□□ -1.88
YNL040WP53960 YBR238CYBR238C 2196 nt3.33□□□□□ -1.88
YNL040WP53960 DNM1YLL001W 2274 nt3.33□□□□□ -1.88
YNL040WP53960 CIN8YEL061C 3003 nt3.32□□□□□ -1.88
YNL040WP53960 YGL214WYGL214W 486 nt3.32□□□□□ -1.88
YNL040WP53960 YIL175WYIL175W 318 nt3.32□□□□□ -1.88
YNL040WP53960 YJL222W-BYJL222W-B 138 nt3.32□□□□□ -1.88
YNL040WP53960 MRP8YKL142W 660 nt3.32□□□□□ -1.88
YNL040WP53960 RPL17AYKL180W 555 nt3.32□□□□□ -1.88
YNL040WP53960 ARG80YMR042W 534 nt3.32□□□□□ -1.88
YNL040WP53960 PSF3YOL146W 585 nt3.32□□□□□ -1.88
YNL040WP53960 RPA43YOR340C 981 nt3.32□□□□□ -1.88
YNL040WP53960 PCI8YIL071C 1335 nt3.32□□□□□ -1.88
YNL040WP53960 HMS1YOR032C 1305 nt3.32□□□□□ -1.88
YNL040WP53960 NOP4YPL043W 2058 nt3.31□□□□□ -1.88
YNL040WP53960 BYE1YKL005C 1785 nt3.31□□□□□ -1.88
YNL040WP53960 POL1YNL102W 4407 nt3.31□□□□□ -1.88
YNL040WP53960 PRP3YDR473C 1410 nt3.31□□□□□ -1.88
YNL040WP53960 ABD1YBR236C 1311 nt3.31□□□□□ -1.88
YNL040WP53960 YER039C-AYER039C-A 219 nt3.31□□□□□ -1.88
YNL040WP53960 TOS8YGL096W 831 nt3.31□□□□□ -1.88
YNL040WP53960 PEX21YGR239C 867 nt3.31□□□□□ -1.88
YNL040WP53960 YOR186WYOR186W 435 nt3.31□□□□□ -1.88
YNL040WP53960 OAF3YKR064W 2592 nt3.31□□□□□ -1.88
YNL040WP53960 YHR080CYHR080C 4038 nt3.31□□□□□ -1.88
YNL040WP53960 YVC1YOR087W 2028 nt3.31□□□□□ -1.88
YNL040WP53960 APN2YBL019W 1563 nt3.3□□□□□ -1.88
YNL040WP53960 PEP7YDR323C 1548 nt3.3□□□□□ -1.88
YNL040WP53960 YMR018WYMR018W 1545 nt3.3□□□□□ -1.88
YNL040WP53960 YHP1YDR451C 1062 nt3.3□□□□□ -1.88
YNL040WP53960 SCL1YGL011C 759 nt3.3□□□□□ -1.88
YNL040WP53960 ERV29YGR284C 933 nt3.3□□□□□ -1.88
YNL040WP53960 BET1YIL004C 429 nt3.3□□□□□ -1.88
YNL040WP53960 RPL19BYBL027W 570 nt3.3□□□□□ -1.88
YNL040WP53960 YMR294W-AYMR294W-A 360 nt3.3□□□□□ -1.88
YNL040WP53960 IST1YNL265C 897 nt3.3□□□□□ -1.88
YNL040WP53960 RPL18AYOL120C 561 nt3.3□□□□□ -1.88
YNL040WP53960 IDH2YOR136W 1110 nt3.3□□□□□ -1.88
YNL040WP53960 DDP1YOR163W 567 nt3.3□□□□□ -1.88
YNL040WP53960 BMT2YBR141C 1014 nt3.3□□□□□ -1.88
YNL040WP53960 CAF130YGR134W 3369 nt3.3□□□□□ -1.88
YNL040WP53960 SEC6YIL068C 2418 nt3.3□□□□□ -1.88
YNL040WP53960 RPN1YHR027C 2982 nt3.3□□□□□ -1.88
YNL040WP53960 MEF1YLR069C 2286 nt3.3□□□□□ -1.88
YNL040WP53960 DSL1YNL258C 2265 nt3.3□□□□□ -1.88
YNL040WP53960 VPS33YLR396C 2076 nt3.29□□□□□ -1.88
YNL040WP53960 MET10YFR030W 3108 nt3.29□□□□□ -1.88
YNL040WP53960 APL4YPR029C 2499 nt3.29□□□□□ -1.88
YNL040WP53960 MSS2YDL107W 1056 nt3.29□□□□□ -1.88
YNL040WP53960 DTD1YDL219W 453 nt3.29□□□□□ -1.88
YNL040WP53960 PHM6YDR281C 315 nt3.29□□□□□ -1.88
YNL040WP53960 PAU10YDR542W 363 nt3.29□□□□□ -1.88
YNL040WP53960 CDC26YFR036W 375 nt3.29□□□□□ -1.88
YNL040WP53960 PAU11YGL261C 363 nt3.29□□□□□ -1.88
YNL040WP53960 YGR219WYGR219W 342 nt3.29□□□□□ -1.88
YNL040WP53960 PAU13YHL046C 363 nt3.29□□□□□ -1.88
YNL040WP53960 YUH1YJR099W 711 nt3.29□□□□□ -1.88
YNL040WP53960 PAU4YLR461W 363 nt3.29□□□□□ -1.88
YNL040WP53960 YNL144W-AYNL144W-A 84 nt3.29□□□□□ -1.88
YNL040WP53960 snR17asnR17a 333 nt3.29□□□□□ -1.88
YNL040WP53960 YFL040WYFL040W 1623 nt3.29□□□□□ -1.88
YNL040WP53960 CTK1YKL139W 1587 nt3.29□□□□□ -1.88
YNL040WP53960 PGS1YCL004W 1566 nt3.29□□□□□ -1.88
YNL040WP53960 RRN7YJL025W 1545 nt3.29□□□□□ -1.88
YNL040WP53960 IRC6YFR043C 714 nt3.28□□□□□ -1.88
YNL040WP53960 YGR204C-AYGR204C-A 114 nt3.28□□□□□ -1.88
YNL040WP53960 COX23YHR116W 456 nt3.28□□□□□ -1.88
YNL040WP53960 YBR053CYBR053C 1077 nt3.28□□□□□ -1.88
YNL040WP53960 UBP12YJL197W 3765 nt3.28□□□□□ -1.88
YNL040WP53960 CHS2YBR038W 2892 nt3.27□□□□□ -1.89
YNL040WP53960 UTP6YDR449C 1323 nt3.27□□□□□ -1.89
YNL040WP53960 NRP1YDL167C 2160 nt3.27□□□□□ -1.89
YNL040WP53960 YCR007CYCR007C 720 nt3.27□□□□□ -1.89
YNL040WP53960 QRI7YDL104C 1224 nt3.27□□□□□ -1.89
YNL040WP53960 RMD5YDR255C 1266 nt3.27□□□□□ -1.89
YNL040WP53960 NSE3YDR288W 912 nt3.27□□□□□ -1.89
YNL040WP53960 DOG2YHR043C 741 nt3.27□□□□□ -1.89
YNL040WP53960 PAN5YHR063C 1140 nt3.27□□□□□ -1.89
YNL040WP53960 CDC73YLR418C 1182 nt3.27□□□□□ -1.89
YNL040WP53960 TVP18YMR071C 504 nt3.27□□□□□ -1.89
YNL040WP53960 YOL024WYOL024W 519 nt3.27□□□□□ -1.89
YNL040WP53960 TMA16YOR252W 537 nt3.27□□□□□ -1.89
YNL040WP53960 YGR027W-BYGR027W-B 5268 nt3.27□□□□□ -1.89
YNL040WP53960 YLR227W-BYLR227W-B 5268 nt3.27□□□□□ -1.89
YNL040WP53960 YPR158C-DYPR158C-D 5268 nt3.27□□□□□ -1.89
YNL040WP53960 PEX1YKL197C 3132 nt3.26□□□□□ -1.89
YNL040WP53960 ARO1YDR127W 4767 nt3.26□□□□□ -1.89
YNL040WP53960 DET1YDR051C 1005 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms