Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 tQ(UUG)D2tQ(UUG)D2 72 nt4.34□□□□□ -1.71
SPC98P53540 tQ(UUG)D3tQ(UUG)D3 72 nt4.34□□□□□ -1.71
SPC98P53540 tQ(UUG)E1tQ(UUG)E1 72 nt4.34□□□□□ -1.71
SPC98P53540 tQ(UUG)HtQ(UUG)H 72 nt4.34□□□□□ -1.71
SPC98P53540 tQ(UUG)LtQ(UUG)L 72 nt4.34□□□□□ -1.71
SPC98P53540 ARC15YIL062C 465 nt4.34□□□□□ -1.71
SPC98P53540 YJL147CYJL147C 1149 nt4.34□□□□□ -1.71
SPC98P53540 BUD19YJL188C 309 nt4.34□□□□□ -1.71
SPC98P53540 RPS1BYML063W 768 nt4.34□□□□□ -1.71
SPC98P53540 YMR187CYMR187C 1296 nt4.34□□□□□ -1.71
SPC98P53540 ATG8YBL078C 354 nt4.34□□□□□ -1.71
SPC98P53540 YOR366WYOR366W 354 nt4.34□□□□□ -1.71
SPC98P53540 OPY2YPR075C 1083 nt4.34□□□□□ -1.71
SPC98P53540 VPS69YPR087W 321 nt4.34□□□□□ -1.71
SPC98P53540 POP7YBR167C 423 nt4.34□□□□□ -1.71
SPC98P53540 ERG9YHR190W 1335 nt4.34□□□□□ -1.71
SPC98P53540 PCI8YIL071C 1335 nt4.34□□□□□ -1.71
SPC98P53540 BRE4YDL231C 3378 nt4.33□□□□□ -1.72
SPC98P53540 STB2YMR053C 2553 nt4.33□□□□□ -1.72
SPC98P53540 TRE1YPL176C 2352 nt4.33□□□□□ -1.72
SPC98P53540 HPR1YDR138W 2259 nt4.33□□□□□ -1.72
SPC98P53540 NUP2YLR335W 2163 nt4.33□□□□□ -1.72
SPC98P53540 EXO70YJL085W 1872 nt4.33□□□□□ -1.72
SPC98P53540 SUP56tL(CAA)A 82 nt4.33□□□□□ -1.72
SPC98P53540 SUP53tL(CAA)C 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)DtL(CAA)D 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)G1tL(CAA)G1 82 nt4.33□□□□□ -1.72
SPC98P53540 SUP54tL(CAA)G2 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)G3tL(CAA)G3 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)KtL(CAA)K 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)LtL(CAA)L 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)MtL(CAA)M 82 nt4.33□□□□□ -1.72
SPC98P53540 tL(CAA)NtL(CAA)N 82 nt4.33□□□□□ -1.72
SPC98P53540 BUD13YGL174W 801 nt4.33□□□□□ -1.72
SPC98P53540 SRB5YGR104C 924 nt4.33□□□□□ -1.72
SPC98P53540 RDN5-1RDN5-1 121 nt4.33□□□□□ -1.72
SPC98P53540 YPT52YKR014C 705 nt4.33□□□□□ -1.72
SPC98P53540 RDN5-6RDN5-6 121 nt4.33□□□□□ -1.72
SPC98P53540 DLT1YMR126C 1029 nt4.33□□□□□ -1.72
SPC98P53540 TOM7YNL070W 183 nt4.33□□□□□ -1.72
SPC98P53540 MPP6YNR024W 561 nt4.33□□□□□ -1.72
SPC98P53540 PPT2YPL148C 522 nt4.33□□□□□ -1.72
SPC98P53540 YGR266WYGR266W 2106 nt4.33□□□□□ -1.72
SPC98P53540 LAS1YKR063C 1509 nt4.32□□□□□ -1.72
SPC98P53540 SCM4YGR049W 564 nt4.32□□□□□ -1.72
SPC98P53540 YGR115CYGR115C 780 nt4.32□□□□□ -1.72
SPC98P53540 GCD14YJL125C 1152 nt4.32□□□□□ -1.72
SPC98P53540 STE18YJR086W 333 nt4.32□□□□□ -1.72
SPC98P53540 MET14YKL001C 609 nt4.32□□□□□ -1.72
SPC98P53540 MAP1YLR244C 1164 nt4.32□□□□□ -1.72
SPC98P53540 POP3YNL282W 588 nt4.32□□□□□ -1.72
SPC98P53540 GAL7YBR018C 1101 nt4.32□□□□□ -1.72
SPC98P53540 TAF14YPL129W 735 nt4.32□□□□□ -1.72
SPC98P53540 ERV15YBR210W 429 nt4.32□□□□□ -1.72
SPC98P53540 SBE2YDR351W 2595 nt4.32□□□□□ -1.72
SPC98P53540 BCS1YDR375C 1371 nt4.31□□□□□ -1.72
SPC98P53540 YCR108CYCR108C 192 nt4.31□□□□□ -1.72
SPC98P53540 WBP1YEL002C 1293 nt4.31□□□□□ -1.72
SPC98P53540 YGL109WYGL109W 324 nt4.31□□□□□ -1.72
SPC98P53540 GTR2YGR163W 1026 nt4.31□□□□□ -1.72
SPC98P53540 TDA5YLR426W 981 nt4.31□□□□□ -1.72
SPC98P53540 SEC14YMR079W 915 nt4.31□□□□□ -1.72
SPC98P53540 SUA7YPR086W 1038 nt4.31□□□□□ -1.72
SPC98P53540 TRS20YBR254C 528 nt4.31□□□□□ -1.72
SPC98P53540 PRP28YDR243C 1767 nt4.31□□□□□ -1.72
SPC98P53540 MTH1YDR277C 1302 nt4.3□□□□□ -1.72
SPC98P53540 HSP30YCR021C 999 nt4.3□□□□□ -1.72
SPC98P53540 MTC7YEL033W 420 nt4.3□□□□□ -1.72
SPC98P53540 YGL242CYGL242C 546 nt4.3□□□□□ -1.72
SPC98P53540 YGR269WYGR269W 327 nt4.3□□□□□ -1.72
SPC98P53540 CUZ1YNL155W 825 nt4.3□□□□□ -1.72
SPC98P53540 YOR034C-AYOR034C-A 243 nt4.3□□□□□ -1.72
SPC98P53540 RRG7YOR305W 729 nt4.3□□□□□ -1.72
SPC98P53540 GRC3YLL035W 1899 nt4.3□□□□□ -1.72
SPC98P53540 YDR131CYDR131C 1671 nt4.29□□□□□ -1.72
SPC98P53540 YPL260WYPL260W 1656 nt4.29□□□□□ -1.72
SPC98P53540 CDC9YDL164C 2268 nt4.29□□□□□ -1.72
SPC98P53540 BOI2YER114C 3123 nt4.29□□□□□ -1.72
SPC98P53540 OCA6YDR067C 675 nt4.29□□□□□ -1.72
SPC98P53540 YDR274CYDR274C 372 nt4.29□□□□□ -1.72
SPC98P53540 PTI1YGR156W 1278 nt4.29□□□□□ -1.72
SPC98P53540 PRS3YHL011C 963 nt4.29□□□□□ -1.72
SPC98P53540 CAP2YIL034C 864 nt4.29□□□□□ -1.72
SPC98P53540 APQ13YJL075C 417 nt4.29□□□□□ -1.72
SPC98P53540 RAD27YKL113C 1149 nt4.29□□□□□ -1.72
SPC98P53540 YLR217WYLR217W 324 nt4.29□□□□□ -1.72
SPC98P53540 CUP9YPL177C 921 nt4.29□□□□□ -1.72
SPC98P53540 RSA1YPL193W 1146 nt4.29□□□□□ -1.72
SPC98P53540 YBR071WYBR071W 636 nt4.29□□□□□ -1.72
SPC98P53540 OLE1YGL055W 1533 nt4.29□□□□□ -1.72
SPC98P53540 AIM21YIR003W 2040 nt4.29□□□□□ -1.72
SPC98P53540 MET4YNL103W 2019 nt4.29□□□□□ -1.72
SPC98P53540 CTT1YGR088W 1689 nt4.29□□□□□ -1.72
SPC98P53540 HAP4YKL109W 1665 nt4.29□□□□□ -1.72
SPC98P53540 CLG1YGL215W 1359 nt4.28□□□□□ -1.72
SPC98P53540 YOL075CYOL075C 3885 nt4.28□□□□□ -1.72
SPC98P53540 YDR210W-AYDR210W-A 1317 nt4.28□□□□□ -1.72
SPC98P53540 YCR085WYCR085W 354 nt4.28□□□□□ -1.72
SPC98P53540 CNN1YFR046C 1086 nt4.28□□□□□ -1.72
SPC98P53540 MRP4YHL004W 1185 nt4.28□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms