Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZNF140P52738 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF140P52738 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF140P52738 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF140P52738 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF140P52738 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ZNF140P52738 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.53■■□□□ 1.04
ZNF140P52738 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF140P52738 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF140P52738 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF140P52738 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF140P52738 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF140P52738 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF140P52738 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF140P52738 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF140P52738 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF140P52738 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF140P52738 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF140P52738 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF140P52738 MIR572-201ENST00000384983 95 ntBASIC21.52■■□□□ 1.04
ZNF140P52738 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF140P52738 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF140P52738 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF140P52738 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF140P52738 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF140P52738 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF140P52738 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF140P52738 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF140P52738 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.52■■□□□ 1.03
ZNF140P52738 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF140P52738 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF140P52738 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF140P52738 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF140P52738 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZNF140P52738 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 AP004607.7-201ENST00000527152 1677 ntBASIC21.5■■□□□ 1.03
ZNF140P52738 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF140P52738 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF140P52738 AL034346.1-201ENST00000568244 1277 ntBASIC21.5■■□□□ 1.03
ZNF140P52738 AC105233.4-201ENST00000642045 216 ntBASIC21.5■■□□□ 1.03
ZNF140P52738 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF140P52738 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.49■■□□□ 1.03
ZNF140P52738 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.49■■□□□ 1.03
ZNF140P52738 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
ZNF140P52738 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 AC010542.4-201ENST00000563151 1910 ntBASIC21.49■■□□□ 1.03
ZNF140P52738 AC026471.6-201ENST00000622954 1905 ntBASIC21.49■■□□□ 1.03
ZNF140P52738 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
ZNF140P52738 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF140P52738 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.48■■□□□ 1.03
ZNF140P52738 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF140P52738 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF140P52738 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.48■■□□□ 1.03
ZNF140P52738 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF140P52738 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF140P52738 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.48■■□□□ 1.03
ZNF140P52738 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.48■■□□□ 1.03
ZNF140P52738 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.48■■□□□ 1.03
ZNF140P52738 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF140P52738 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF140P52738 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ZNF140P52738 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF140P52738 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF140P52738 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF140P52738 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
ZNF140P52738 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF140P52738 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.47■■□□□ 1.03
ZNF140P52738 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.47■■□□□ 1.03
ZNF140P52738 AC105265.2-201ENST00000467189 838 ntBASIC21.47■■□□□ 1.03
ZNF140P52738 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.47■■□□□ 1.03
ZNF140P52738 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF140P52738 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF140P52738 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF140P52738 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF140P52738 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF140P52738 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZNF140P52738 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF140P52738 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF140P52738 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF140P52738 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF140P52738 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF140P52738 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms