Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RPL3P39023 AL034346.1-201ENST00000568244 1277 ntBASIC20.44■□□□□ 0.86
RPL3P39023 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RPL3P39023 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPL3P39023 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RPL3P39023 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
RPL3P39023 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.43■□□□□ 0.86
RPL3P39023 AP005435.1-201ENST00000529293 1178 ntBASIC20.43■□□□□ 0.86
RPL3P39023 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.43■□□□□ 0.86
RPL3P39023 MIR4466-201ENST00000606121 54 ntBASIC20.43■□□□□ 0.86
RPL3P39023 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPL3P39023 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RPL3P39023 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.42■□□□□ 0.86
RPL3P39023 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RPL3P39023 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RPL3P39023 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
RPL3P39023 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.42■□□□□ 0.86
RPL3P39023 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
RPL3P39023 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPL3P39023 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPL3P39023 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.41■□□□□ 0.86
RPL3P39023 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.41■□□□□ 0.86
RPL3P39023 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPL3P39023 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPL3P39023 AC131281.2-201ENST00000520478 145 ntBASIC20.41■□□□□ 0.86
RPL3P39023 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.41■□□□□ 0.86
RPL3P39023 AC104564.3-201ENST00000582367 638 ntBASIC20.41■□□□□ 0.86
RPL3P39023 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RPL3P39023 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPL3P39023 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.41■□□□□ 0.86
RPL3P39023 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPL3P39023 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.41■□□□□ 0.86
RPL3P39023 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.41■□□□□ 0.86
RPL3P39023 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPL3P39023 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPL3P39023 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RPL3P39023 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPL3P39023 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.4■□□□□ 0.86
RPL3P39023 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.4■□□□□ 0.86
RPL3P39023 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPL3P39023 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.4■□□□□ 0.86
RPL3P39023 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.4■□□□□ 0.86
RPL3P39023 AC010525.1-201ENST00000585559 441 ntBASIC20.4■□□□□ 0.86
RPL3P39023 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.4■□□□□ 0.86
RPL3P39023 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
RPL3P39023 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.4■□□□□ 0.86
RPL3P39023 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.39■□□□□ 0.86
RPL3P39023 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPL3P39023 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.39■□□□□ 0.85
RPL3P39023 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RPL3P39023 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPL3P39023 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.38■□□□□ 0.85
RPL3P39023 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RPL3P39023 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.38■□□□□ 0.85
RPL3P39023 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.38■□□□□ 0.85
RPL3P39023 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPL3P39023 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 AC007375.3-201ENST00000600936 2314 ntBASIC20.38■□□□□ 0.85
RPL3P39023 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPL3P39023 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.37■□□□□ 0.85
RPL3P39023 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.37■□□□□ 0.85
RPL3P39023 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.37■□□□□ 0.85
RPL3P39023 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPL3P39023 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms