Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
ATP2B4P23634 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATP2B4P23634 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.34■■□□□ 1.81
ATP2B4P23634 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATP2B4P23634 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.34■■□□□ 1.81
ATP2B4P23634 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.34■■□□□ 1.81
ATP2B4P23634 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.34■■□□□ 1.81
ATP2B4P23634 AL034346.1-201ENST00000568244 1277 ntBASIC26.34■■□□□ 1.81
ATP2B4P23634 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
ATP2B4P23634 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATP2B4P23634 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ATP2B4P23634 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2B4P23634 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2B4P23634 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2B4P23634 GUSBP6-202ENST00000438529 1198 ntBASIC26.33■■□□□ 1.81
ATP2B4P23634 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2B4P23634 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP2B4P23634 LINC00526-201ENST00000581067 1875 ntBASIC26.33■■□□□ 1.81
ATP2B4P23634 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.32■■□□□ 1.8
ATP2B4P23634 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ATP2B4P23634 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2B4P23634 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2B4P23634 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.32■■□□□ 1.8
ATP2B4P23634 CNN2P6-201ENST00000439038 900 ntBASIC26.32■■□□□ 1.8
ATP2B4P23634 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.32■■□□□ 1.8
ATP2B4P23634 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.32■■□□□ 1.8
ATP2B4P23634 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2B4P23634 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP2B4P23634 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.31■■□□□ 1.8
ATP2B4P23634 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.31■■□□□ 1.8
ATP2B4P23634 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
ATP2B4P23634 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2B4P23634 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2B4P23634 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.31■■□□□ 1.8
ATP2B4P23634 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.31■■□□□ 1.8
ATP2B4P23634 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2B4P23634 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP2B4P23634 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.31■■□□□ 1.8
ATP2B4P23634 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
ATP2B4P23634 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ATP2B4P23634 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
ATP2B4P23634 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.31■■□□□ 1.8
ATP2B4P23634 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2B4P23634 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ATP2B4P23634 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.3■■□□□ 1.8
ATP2B4P23634 AC010536.3-201ENST00000620306 533 ntBASIC26.3■■□□□ 1.8
ATP2B4P23634 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ATP2B4P23634 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
ATP2B4P23634 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
ATP2B4P23634 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP2B4P23634 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2B4P23634 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2B4P23634 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 CD99P1-205ENST00000527459 561 ntBASIC26.28■■□□□ 1.8
ATP2B4P23634 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 EEF1DP3-203ENST00000566025 782 ntBASIC26.28■■□□□ 1.8
ATP2B4P23634 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2B4P23634 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.28■■□□□ 1.8
ATP2B4P23634 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.28■■□□□ 1.8
ATP2B4P23634 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ATP2B4P23634 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
ATP2B4P23634 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
ATP2B4P23634 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.27■■□□□ 1.8
ATP2B4P23634 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.27■■□□□ 1.8
ATP2B4P23634 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.27■■□□□ 1.8
ATP2B4P23634 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP2B4P23634 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.27■■□□□ 1.8
ATP2B4P23634 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 SLC29A4P1-201ENST00000398760 971 ntBASIC26.26■■□□□ 1.79
ATP2B4P23634 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
ATP2B4P23634 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.26■■□□□ 1.79
ATP2B4P23634 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ATP2B4P23634 SLC7A5P1-201ENST00000568957 537 ntBASIC26.26■■□□□ 1.79
ATP2B4P23634 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP2B4P23634 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.25■■□□□ 1.79
ATP2B4P23634 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.25■■□□□ 1.79
ATP2B4P23634 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.25■■□□□ 1.79
ATP2B4P23634 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP2B4P23634 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
ATP2B4P23634 AL138781.1-201ENST00000566567 1274 ntBASIC26.25■■□□□ 1.79
ATP2B4P23634 AC053503.5-201ENST00000601508 636 ntBASIC26.25■■□□□ 1.79
ATP2B4P23634 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms