Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NFKB1P19838 AC099791.1-201ENST00000416440 715 ntBASIC21.95■■□□□ 1.1
NFKB1P19838 AP001330.3-201ENST00000520123 633 ntBASIC21.95■■□□□ 1.1
NFKB1P19838 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NFKB1P19838 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.95■■□□□ 1.1
NFKB1P19838 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.95■■□□□ 1.1
NFKB1P19838 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NFKB1P19838 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 EDA-201ENST00000338901 1233 ntBASIC21.94■■□□□ 1.1
NFKB1P19838 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.94■■□□□ 1.1
NFKB1P19838 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.94■■□□□ 1.1
NFKB1P19838 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NFKB1P19838 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NFKB1P19838 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.94■■□□□ 1.1
NFKB1P19838 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NFKB1P19838 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NFKB1P19838 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.93■■□□□ 1.1
NFKB1P19838 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 AC133561.4-201ENST00000566112 224 ntBASIC21.93■■□□□ 1.1
NFKB1P19838 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NFKB1P19838 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.93■■□□□ 1.1
NFKB1P19838 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.93■■□□□ 1.1
NFKB1P19838 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 AC010542.4-201ENST00000563151 1910 ntBASIC21.92■■□□□ 1.1
NFKB1P19838 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.92■■□□□ 1.1
NFKB1P19838 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.92■■□□□ 1.1
NFKB1P19838 AC027682.1-201ENST00000562846 899 ntBASIC21.92■■□□□ 1.1
NFKB1P19838 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.92■■□□□ 1.1
NFKB1P19838 AL031432.3-201ENST00000607698 485 ntBASIC21.92■■□□□ 1.1
NFKB1P19838 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.92■■□□□ 1.1
NFKB1P19838 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NFKB1P19838 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NFKB1P19838 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NFKB1P19838 IGHV3-19-201ENST00000521488 291 ntBASIC21.91■■□□□ 1.1
NFKB1P19838 AF213884.3-201ENST00000563833 479 ntBASIC21.91■■□□□ 1.1
NFKB1P19838 AL139246.5-201ENST00000606645 996 ntBASIC21.91■■□□□ 1.1
NFKB1P19838 AL355001.2-201ENST00000620617 1191 ntBASIC21.91■■□□□ 1.1
NFKB1P19838 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.91■■□□□ 1.1
NFKB1P19838 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NFKB1P19838 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.91■■□□□ 1.1
NFKB1P19838 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NFKB1P19838 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NFKB1P19838 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 MIR939-201ENST00000401314 82 ntBASIC21.9■■□□□ 1.1
NFKB1P19838 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.9■■□□□ 1.1
NFKB1P19838 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.9■■□□□ 1.1
NFKB1P19838 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.9■■□□□ 1.1
NFKB1P19838 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NFKB1P19838 AC026471.6-201ENST00000622954 1905 ntBASIC21.9■■□□□ 1.1
NFKB1P19838 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NFKB1P19838 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
NFKB1P19838 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NFKB1P19838 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.89■■□□□ 1.1
NFKB1P19838 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NFKB1P19838 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NFKB1P19838 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NFKB1P19838 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NFKB1P19838 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.89■■□□□ 1.09
NFKB1P19838 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.89■■□□□ 1.09
NFKB1P19838 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NFKB1P19838 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NFKB1P19838 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.89■■□□□ 1.09
NFKB1P19838 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.89■■□□□ 1.09
NFKB1P19838 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NFKB1P19838 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.89■■□□□ 1.09
NFKB1P19838 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.89■■□□□ 1.09
NFKB1P19838 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
NFKB1P19838 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.88■■□□□ 1.09
NFKB1P19838 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NFKB1P19838 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NFKB1P19838 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.88■■□□□ 1.09
NFKB1P19838 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NFKB1P19838 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
NFKB1P19838 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NFKB1P19838 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.88■■□□□ 1.09
NFKB1P19838 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.88■■□□□ 1.09
NFKB1P19838 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NFKB1P19838 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms