Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.92■□□□□ 0.94
PCNAP12004 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.92■□□□□ 0.94
PCNAP12004 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.92■□□□□ 0.94
PCNAP12004 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.92■□□□□ 0.94
PCNAP12004 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.92■□□□□ 0.94
PCNAP12004 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCNAP12004 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCNAP12004 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCNAP12004 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PCNAP12004 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCNAP12004 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.91■□□□□ 0.94
PCNAP12004 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCNAP12004 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.91■□□□□ 0.94
PCNAP12004 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.91■□□□□ 0.94
PCNAP12004 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCNAP12004 AL024507.2-201ENST00000606070 2574 ntBASIC20.91■□□□□ 0.94
PCNAP12004 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCNAP12004 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.91■□□□□ 0.94
PCNAP12004 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCNAP12004 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCNAP12004 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCNAP12004 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.9■□□□□ 0.94
PCNAP12004 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCNAP12004 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCNAP12004 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.9■□□□□ 0.94
PCNAP12004 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCNAP12004 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCNAP12004 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCNAP12004 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCNAP12004 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
PCNAP12004 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PCNAP12004 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.89■□□□□ 0.94
PCNAP12004 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PCNAP12004 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCNAP12004 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.89■□□□□ 0.93
PCNAP12004 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCNAP12004 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.89■□□□□ 0.93
PCNAP12004 SLC47A1P1-202ENST00000449666 945 ntBASIC20.89■□□□□ 0.93
PCNAP12004 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.89■□□□□ 0.93
PCNAP12004 AL136162.1-201ENST00000607711 1078 ntBASIC20.89■□□□□ 0.93
PCNAP12004 AC087239.1-201ENST00000622671 572 ntBASIC20.89■□□□□ 0.93
PCNAP12004 AC068587.7-201ENST00000641602 218 ntBASIC20.89■□□□□ 0.93
PCNAP12004 C11orf96-202ENST00000528572 1834 ntBASIC20.89■□□□□ 0.93
PCNAP12004 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.89■□□□□ 0.93
PCNAP12004 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCNAP12004 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.88■□□□□ 0.93
PCNAP12004 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCNAP12004 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.88■□□□□ 0.93
PCNAP12004 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCNAP12004 MIR4767-201ENST00000582827 78 ntBASIC20.88■□□□□ 0.93
PCNAP12004 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
PCNAP12004 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCNAP12004 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
PCNAP12004 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
PCNAP12004 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNAP12004 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCNAP12004 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNAP12004 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCNAP12004 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCNAP12004 AC024257.2-201ENST00000549699 147 ntBASIC20.87■□□□□ 0.93
PCNAP12004 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.87■□□□□ 0.93
PCNAP12004 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNAP12004 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNAP12004 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCNAP12004 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.86■□□□□ 0.93
PCNAP12004 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCNAP12004 AC096631.2-201ENST00000436136 790 ntBASIC20.86■□□□□ 0.93
PCNAP12004 AC079089.2-201ENST00000531211 1277 ntBASIC20.86■□□□□ 0.93
PCNAP12004 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PCNAP12004 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.86■□□□□ 0.93
PCNAP12004 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNAP12004 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCNAP12004 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms