Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB40ALP0C0E4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAB40ALP0C0E4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 AC079089.2-201ENST00000531211 1277 ntBASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 RAP2CP1-201ENST00000605103 478 ntBASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 AC073111.5-205ENST00000641717 521 ntBASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB40ALP0C0E4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 CDCA4P2-201ENST00000441182 718 ntBASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB40ALP0C0E4 KRT87P-202ENST00000534226 1464 ntBASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
RAB40ALP0C0E4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 AC026185.1-201ENST00000445748 174 ntBASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40ALP0C0E4 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40ALP0C0E4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40ALP0C0E4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.27■□□□□ 0.83
RAB40ALP0C0E4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB40ALP0C0E4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40ALP0C0E4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms