Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 PLP2YOR281C 861 nt3.47□□□□□ -1.85
RAD3P06839 DRS2YAL026C 4068 nt3.47□□□□□ -1.85
RAD3P06839 MDN1YLR106C 14733 nt3.47□□□□□ -1.85
RAD3P06839 PRR2YDL214C 2100 nt3.47□□□□□ -1.85
RAD3P06839 BUD30YDL151C 582 nt3.46□□□□□ -1.86
RAD3P06839 DYN2YDR424C 279 nt3.46□□□□□ -1.86
RAD3P06839 SDT1YGL224C 843 nt3.46□□□□□ -1.86
RAD3P06839 SCM4YGR049W 564 nt3.46□□□□□ -1.86
RAD3P06839 YIL025CYIL025C 375 nt3.46□□□□□ -1.86
RAD3P06839 YJL028WYJL028W 336 nt3.46□□□□□ -1.86
RAD3P06839 PPA2YMR267W 933 nt3.46□□□□□ -1.86
RAD3P06839 MCK1YNL307C 1128 nt3.46□□□□□ -1.86
RAD3P06839 ROM1YGR070W 3468 nt3.46□□□□□ -1.86
RAD3P06839 RSF2YJR127C 4143 nt3.46□□□□□ -1.86
RAD3P06839 YBR238CYBR238C 2196 nt3.46□□□□□ -1.86
RAD3P06839 PGS1YCL004W 1566 nt3.46□□□□□ -1.86
RAD3P06839 STU2YLR045C 2667 nt3.46□□□□□ -1.86
RAD3P06839 SRO9YCL037C 1305 nt3.45□□□□□ -1.86
RAD3P06839 RRP5YMR229C 5190 nt3.45□□□□□ -1.86
RAD3P06839 NUP60YAR002W 1620 nt3.45□□□□□ -1.86
RAD3P06839 STT4YLR305C 5703 nt3.45□□□□□ -1.86
RAD3P06839 YDR249CYDR249C 1122 nt3.45□□□□□ -1.86
RAD3P06839 RPL30YGL030W 318 nt3.45□□□□□ -1.86
RAD3P06839 BCD1YHR040W 1101 nt3.45□□□□□ -1.86
RAD3P06839 YPT35YHR105W 645 nt3.45□□□□□ -1.86
RAD3P06839 MGA1YGR249W 1371 nt3.45□□□□□ -1.86
RAD3P06839 TDA3YHR009C 1572 nt3.45□□□□□ -1.86
RAD3P06839 SER3YER081W 1410 nt3.44□□□□□ -1.86
RAD3P06839 YNR063WYNR063W 1824 nt3.44□□□□□ -1.86
RAD3P06839 MIF2YKL089W 1650 nt3.44□□□□□ -1.86
RAD3P06839 ALG1YBR110W 1350 nt3.44□□□□□ -1.86
RAD3P06839 APA2YDR530C 978 nt3.44□□□□□ -1.86
RAD3P06839 HAT2YEL056W 1206 nt3.44□□□□□ -1.86
RAD3P06839 YAL004WYAL004W 648 nt3.44□□□□□ -1.86
RAD3P06839 SPC3YLR066W 555 nt3.44□□□□□ -1.86
RAD3P06839 RPN13YLR421C 471 nt3.44□□□□□ -1.86
RAD3P06839 SIL1YOL031C 1266 nt3.44□□□□□ -1.86
RAD3P06839 EPO1YMR124W 2832 nt3.44□□□□□ -1.86
RAD3P06839 RSC1YGR056W 2787 nt3.44□□□□□ -1.86
RAD3P06839 KAP104YBR017C 2757 nt3.44□□□□□ -1.86
RAD3P06839 RPA135YPR010C 3612 nt3.43□□□□□ -1.86
RAD3P06839 OPI6YDL096C 327 nt3.43□□□□□ -1.86
RAD3P06839 PSF1YDR013W 627 nt3.43□□□□□ -1.86
RAD3P06839 MIX14YDR031W 366 nt3.43□□□□□ -1.86
RAD3P06839 RPC11YDR045C 333 nt3.43□□□□□ -1.86
RAD3P06839 DIB1YPR082C 432 nt3.43□□□□□ -1.86
RAD3P06839 PWP2YCR057C 2772 nt3.43□□□□□ -1.86
RAD3P06839 GIS4YML006C 2325 nt3.43□□□□□ -1.86
RAD3P06839 CUS1YMR240C 1311 nt3.43□□□□□ -1.86
RAD3P06839 ARG5,6YER069W 2592 nt3.42□□□□□ -1.86
RAD3P06839 OKP1YGR179C 1221 nt3.42□□□□□ -1.86
RAD3P06839 ARD1YHR013C 717 nt3.42□□□□□ -1.86
RAD3P06839 ECM4YKR076W 1113 nt3.42□□□□□ -1.86
RAD3P06839 BUD21YOR078W 645 nt3.42□□□□□ -1.86
RAD3P06839 ETP1YHL010C 1758 nt3.42□□□□□ -1.86
RAD3P06839 IMH1YLR309C 2736 nt3.42□□□□□ -1.86
RAD3P06839 LST7YGR057C 729 nt3.41□□□□□ -1.86
RAD3P06839 MTR2YKL186C 555 nt3.41□□□□□ -1.86
RAD3P06839 AHP1YLR109W 531 nt3.41□□□□□ -1.86
RAD3P06839 MFA2YNL145W 117 nt3.41□□□□□ -1.86
RAD3P06839 AIM39YOL053W 1188 nt3.41□□□□□ -1.86
RAD3P06839 RNR1YER070W 2667 nt3.41□□□□□ -1.86
RAD3P06839 NEM1YHR004C 1341 nt3.41□□□□□ -1.86
RAD3P06839 YHL012WYHL012W 1482 nt3.41□□□□□ -1.86
RAD3P06839 ARP4YJL081C 1470 nt3.41□□□□□ -1.86
RAD3P06839 TGL1YKL140W 1647 nt3.41□□□□□ -1.86
RAD3P06839 SLM2YNL047C 1971 nt3.4□□□□□ -1.86
RAD3P06839 CDH1YGL003C 1701 nt3.4□□□□□ -1.87
RAD3P06839 YUH1YJR099W 711 nt3.4□□□□□ -1.87
RAD3P06839 SDO1YLR022C 753 nt3.4□□□□□ -1.87
RAD3P06839 TPM1YNL079C 600 nt3.4□□□□□ -1.87
RAD3P06839 SUI3YPL237W 858 nt3.4□□□□□ -1.87
RAD3P06839 POL31YJR006W 1464 nt3.4□□□□□ -1.87
RAD3P06839 LCB5YLR260W 2064 nt3.39□□□□□ -1.87
RAD3P06839 ERJ5YFR041C 888 nt3.39□□□□□ -1.87
RAD3P06839 ARC15YIL062C 465 nt3.39□□□□□ -1.87
RAD3P06839 SFH5YJL145W 885 nt3.39□□□□□ -1.87
RAD3P06839 PRM15YMR278W 1869 nt3.39□□□□□ -1.87
RAD3P06839 YGR117CYGR117C 1431 nt3.38□□□□□ -1.87
RAD3P06839 PBS2YJL128C 2007 nt3.38□□□□□ -1.87
RAD3P06839 GCN1YGL195W 8019 nt3.38□□□□□ -1.87
RAD3P06839 tF(GAA)DtF(GAA)D 73 nt3.38□□□□□ -1.87
RAD3P06839 tF(GAA)NtF(GAA)N 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)DtK(UUU)D 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)G1tK(UUU)G1 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)G2tK(UUU)G2 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)KtK(UUU)K 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)LtK(UUU)L 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)OtK(UUU)O 73 nt3.38□□□□□ -1.87
RAD3P06839 tK(UUU)PtK(UUU)P 73 nt3.38□□□□□ -1.87
RAD3P06839 APC9YLR102C 798 nt3.38□□□□□ -1.87
RAD3P06839 YMR122W-AYMR122W-A 255 nt3.38□□□□□ -1.87
RAD3P06839 MRPL51YPR100W 423 nt3.38□□□□□ -1.87
RAD3P06839 DAP2YHR028C 2457 nt3.37□□□□□ -1.87
RAD3P06839 AGE2YIL044C 897 nt3.37□□□□□ -1.87
RAD3P06839 RPC34YNR003C 954 nt3.37□□□□□ -1.87
RAD3P06839 MCM16YPR046W 546 nt3.37□□□□□ -1.87
RAD3P06839 CMD1YBR109C 444 nt3.37□□□□□ -1.87
RAD3P06839 BMT2YBR141C 1014 nt3.37□□□□□ -1.87
RAD3P06839 RIB5YBR256C 717 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms