Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
TCRAP04437 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.37■□□□□ 0.21
TCRAP04437 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRAP04437 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRAP04437 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TCRAP04437 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRAP04437 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRAP04437 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.36■□□□□ 0.21
TCRAP04437 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
TCRAP04437 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.36■□□□□ 0.21
TCRAP04437 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.36■□□□□ 0.21
TCRAP04437 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRAP04437 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRAP04437 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TCRAP04437 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TCRAP04437 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.36■□□□□ 0.21
TCRAP04437 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCRAP04437 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TCRAP04437 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TCRAP04437 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRAP04437 LINC01521-201ENST00000504184 1943 ntBASIC16.35■□□□□ 0.21
TCRAP04437 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRAP04437 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 AL157384.1-201ENST00000445995 2473 ntBASIC16.35■□□□□ 0.21
TCRAP04437 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 TSPY13P-201ENST00000338964 914 ntBASIC16.35■□□□□ 0.21
TCRAP04437 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.35■□□□□ 0.21
TCRAP04437 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRAP04437 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.35■□□□□ 0.21
TCRAP04437 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRAP04437 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRAP04437 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TCRAP04437 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.34■□□□□ 0.21
TCRAP04437 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRAP04437 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TCRAP04437 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRAP04437 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRAP04437 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TCRAP04437 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TCRAP04437 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
TCRAP04437 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
TCRAP04437 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRAP04437 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.33■□□□□ 0.2
TCRAP04437 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TCRAP04437 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TCRAP04437 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRAP04437 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.32■□□□□ 0.2
TCRAP04437 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRAP04437 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.32■□□□□ 0.2
TCRAP04437 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRAP04437 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.32■□□□□ 0.2
TCRAP04437 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TCRAP04437 AC009102.2-201ENST00000606772 1639 ntBASIC16.32■□□□□ 0.2
TCRAP04437 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms